Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gabi4511g00010 | ATGACACGCACGCTGAGAATTCTCAAATCCACGGACAACGCCACAGCCATGATAGCTGCGGCGCCACCGCCGGAGGCCGTGGCTTTGGAGTCAGATTTCGTGGTGATTCTGGCAGCCCTTCTCTGCGCCCTCATATGTGTAGTGGGACTCGTCGCCGTCGCCCGCTGCGCGTGGCTCCGGCGAGGTACCGGCACCGGCGGAAGCTCTCCTCGGCAAGCTTTGGCGAACAAGGGCCTGAAGAAGAAGGTGCTCCAGTCGCTGCCAAAGTTCGCTTACGTCGACAGCAACCCGAGCAAGTGGGTTGCCACGCCGGAATGCGCGATTTGTTTGTCGGATTTCGCCGCCGGCGACGAGATCCGGGTGCTGCCGCAGTGTGGGCATGGGTTTCACGTGGGCTGCATAGACACGTGGCTTGGGTCCCACTCGTCGTGCCCTTCGTGTCGGCAGGTTCTGGTGGGTGTGACGAGGTGCCAGAAGTGCGGGCGGTTCCCGGCGGCGAGCGGCGGAGCCACCAGAATGGCGGTTAGTGAACCTGAATTGAAGTCCAGAGAAGACAATGCTGCTGCTAGTAATAATAATATTAACGGCGGTAGTTGTAGTAACAGTAACAGTGGGTTCTTGCCTTGA | 627 | 0.5965 | MTRTLRILKSTDNATAMIAAAPPPEAVALESDFVVILAALLCALICVVGLVAVARCAWLRRGTGTGGSSPRQALANKGLKKKVLQSLPKFAYVDSNPSKWVATPECAICLSDFAAGDEIRVLPQCGHGFHVGCIDTWLGSHSSCPSCRQVLVGVTRCQKCGRFPAASGGATRMAVSEPELKSREDNAAASNNNINGGSCSNSNSGFLP | 208 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gabi4511g00010 | 208 | ProSiteProfiles | Zinc finger RING-type profile. | 106 | 148 | IPR001841 | - | |
Gabi4511g00010 | 208 | SMART | ring_2 | 106 | 147 | IPR001841 | - | |
Gabi4511g00010 | 208 | PANTHER | RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED | 22 | 161 | - | - | |
Gabi4511g00010 | 208 | CDD | RING-H2_EL5-like | 105 | 148 | - | - | |
Gabi4511g00010 | 208 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 67 | 152 | IPR013083 | - | |
Gabi4511g00010 | 208 | FunFam | E3 ubiquitin-protein ligase ATL6 | 68 | 153 | - | - | |
Gabi4511g00010 | 208 | Pfam | Ring finger domain | 105 | 148 | IPR001841 | - | |
Gabi4511g00010 | 208 | SUPERFAMILY | RING/U-box | 84 | 159 | - | - | |
Gabi4511g00010 | 208 | MobiDBLite | consensus disorder prediction | 172 | 195 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gabi4511g00010 | Gabi-Chr4511 | 99375 | 100602 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gabi4511g00010 | 1 | 185 | C3H Transcription Factor Family | AT1G76410 | 56.250 | 3.79e-62 | 190 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gabi4511g00010 | - | - | gmx:100787383 | 298.901 |