Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4510g00008 ATGGCCTCAAGCTCTCTCATCAAACAAAAGCCTTCTGACTCCTCTTGGACGCCAAAACAGAATAAACTGTTTGAGAAAGCACTTGCAAAATATGATATCGATACCCCAGATCGCTGGCAGAATGTAGCTAAAGCAGTTGGTGGCAAATCTGCAGAAGAGGTTAAGAGACACTATGAAATCCTCTTGGAGGATCTGAGACACATAGAATCTGGCCGTGTTCCCATTCCCAAATACAAGTCCAAAGTAAGCAGCAACAATGTTGATGAAGAAGAGAGGTTTCTGAAATATCTTAAGCTGAATTGA 303 0.4191 MASSSLIKQKPSDSSWTPKQNKLFEKALAKYDIDTPDRWQNVAKAVGGKSAEEVKRHYEILLEDLRHIESGRVPIPKYKSKVSSNNVDEEERFLKYLKLN 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4510g00008 100 ProSiteProfiles Myb-like domain profile. 8 62 IPR001005 -
Gabi4510g00008 100 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 86 IPR044636 GO:0003700
Gabi4510g00008 100 FunFam Transcription factor SRM1 8 75 - -
Gabi4510g00008 100 Pfam Myb-like DNA-binding domain 14 58 IPR001005 -
Gabi4510g00008 100 CDD SANT 15 62 IPR001005 -
Gabi4510g00008 100 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Gabi4510g00008 100 Gene3D - 8 75 - -
Gabi4510g00008 100 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Gabi4510g00008 100 SMART sant 12 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4510g00008 Gabi-Chr4510 71604 73384 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Gabi4510g00008 Myb_DNA-binding 2.4e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4510g00008 - - gmx:100798314 181.8