Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4507g00003 ATGACTGTAAATGGACGCTGTTTCGTGGAATGGAAAGAACACTTTGTGTCACAGGAGCGTGGCAACCGTGTGGTCCACTATTTCCTGAAGGATTCAGCTGGGGAATCCATACTTGCGGTTGTGGGCACTGAGAGGAGCCTTAGACACATGTTCTATGTTGTTGCTGAGGAGTTCCTTGAACTTTGTGGATATGACAGTTCCATTCGTGCTGGTTTCAAATGGAGGTCTAGAAGAGAGGTGGTGGATTGGCTGACATCTACGCTGTCAAAGCAGCATCTTCAGGGAGATAGAAATGCATCGCCCAGTCATAATTTGGCACAAGCTCATGAGGCCATAGATAGCAGTATCAATCAAGTTGGTGTTCTGCCGACACAAATAGCAGATGACAAGGGCCTTCTAATAGGTAACTCCAAAGTGCACGATTCAGACATTGCTTGGTCAGGAGTTGCATGGACATGTGGCAAACAACTTAAGCATTATCCTTCTTTTTGCAGGAATGGGATCAAAATAGCAGTTCAATCCTTTGTTTTTGTCATGGCCAAGGGAGAGAGTCATTACATTGCCTATTTGGAGGATATGTATGAAGACAAGAGGGGACAAAAAAAGGTTAAAGTGAGGTGGTTTCACCATAATCAGGAAGTCAAGGATGTAACTCTTGTACGAAATCCTGACCCCCAGGAAGTTTTTATCACTCCTTATTCTCAAGTCATTAGTGCAGAGTGTGTTGATGGTCCCGCTACTGTGTTAACTCGTGAGCATTATTTAAAATGCTTACCTGCTTTTTTCCCTACTTCAATGAACAAAATACATTTTTGCTTTAGGCAATTTAGAAGCAATAAAGTGAAGCCCTTTGACTTGAGTAAACTGTGTGGCTACTATGATCAACCAATTCTCTCTTGCTTGCACCATGATTCCTTCCAATATCCTGAATCGAAGGGCAACAGTCTTGCAGAAGATGAGAGTGCCGGTGATGATGTAAAGCTGGGAGCTAAGAGGAACCGAAGTGGTTGGGGATCTCCTCAGTATTGGACTGGTCACCATGGAGTTAGGAAGTTAATTAGAAGTCAGCAAATGATGGTTTACAAAACCTTCCAGAATGTAAATTATGCTAGGCCAGATAGGCGATTACTTTCCCTGAAGCAGGATGATTGTCAACCTTTGTATTACCCCATGTACAAGATTGATGACAAGATAGAGTTTCTCTGTCAAGACAGTGGCATCAGAGGGTGCTGGTTCAGGTGTACAGTTGTGCAGATATCCCGGAAACAAATGAAAGTTCAATATGATGACGTGCAGGATGAAGATGGAAGAGGCAATCTTGAGGAATGGATTCCTGCTTTCAAATTGGCCATTCCTGATAAAATTGGTATGAGAGATTCTGGCCGGCCAACCATCAGGCCAGCCCCAAATTGTGAGGAACAAGAACTGGCTGTTGCGGTTGGAACTGCAGTTGATGCGTGGTGGAGTGATGGGTGGTGGGAGGGGATTGTTATTGGAATTGATAATTGTGATGAGGATGGTGTGCAAGTCTACTTTCCTGATGAAGGCTTGCTGATGAAAATGTGTAAGAAGGATCTAAGAATATCAAGAGATTGGTTGGGGGACCGGTGGATGAATATTAAGGCAAAGCCTGATATAACCTCTAGTATATTAGCAGTTAATAGTTTTATAGCTAAACATGTTGACTCTCTTAGTTTTGCTAATTCATGTCATAATGTTCCTGTTGGTATCAAGTCGAATGAACCAGATATGGTTGAAGAGAAACTTGTGTGTTGTGAGGCCTCTGCTGAAGACATGGATTGGGCTTTACAAAAAGGTTTTCAAGTTGATAATATTGAGATACATGACAGTTCTGGTAATGAAGTCCACGGTGATTGTGATGACAAGGATAACAACAATGATGATGATAACAAAGATGTTAGCAATGATGATAGGGATATGGAGGTGTTTGCGACTTCTGGAAACGACTATAAAGCCGCAGAACCAATGGAAGTGGCTGTATAA 2004 0.4251 MTVNGRCFVEWKEHFVSQERGNRVVHYFLKDSAGESILAVVGTERSLRHMFYVVAEEFLELCGYDSSIRAGFKWRSRREVVDWLTSTLSKQHLQGDRNASPSHNLAQAHEAIDSSINQVGVLPTQIADDKGLLIGNSKVHDSDIAWSGVAWTCGKQLKHYPSFCRNGIKIAVQSFVFVMAKGESHYIAYLEDMYEDKRGQKKVKVRWFHHNQEVKDVTLVRNPDPQEVFITPYSQVISAECVDGPATVLTREHYLKCLPAFFPTSMNKIHFCFRQFRSNKVKPFDLSKLCGYYDQPILSCLHHDSFQYPESKGNSLAEDESAGDDVKLGAKRNRSGWGSPQYWTGHHGVRKLIRSQQMMVYKTFQNVNYARPDRRLLSLKQDDCQPLYYPMYKIDDKIEFLCQDSGIRGCWFRCTVVQISRKQMKVQYDDVQDEDGRGNLEEWIPAFKLAIPDKIGMRDSGRPTIRPAPNCEEQELAVAVGTAVDAWWSDGWWEGIVIGIDNCDEDGVQVYFPDEGLLMKMCKKDLRISRDWLGDRWMNIKAKPDITSSILAVNSFIAKHVDSLSFANSCHNVPVGIKSNEPDMVEEKLVCCEASAEDMDWALQKGFQVDNIEIHDSSGNEVHGDCDDKDNNNDDDNKDVSNDDRDMEVFATSGNDYKAAEPMEVAV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4507g00003 667 Pfam Agenet domain 395 469 IPR008395 -
Gabi4507g00003 667 ProSiteProfiles BAH domain profile. 168 287 IPR001025 GO:0003682
Gabi4507g00003 667 SMART BAH_4 168 287 IPR001025 GO:0003682
Gabi4507g00003 667 Gene3D - 136 300 IPR043151 -
Gabi4507g00003 667 SMART agenet_At_2 476 534 IPR014002 -
Gabi4507g00003 667 SMART agenet_At_2 390 455 IPR014002 -
Gabi4507g00003 667 Pfam BAH domain 169 258 IPR001025 GO:0003682
Gabi4507g00003 667 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 391 628 - -
Gabi4507g00003 667 MobiDBLite consensus disorder prediction 618 651 - -
Gabi4507g00003 667 MobiDBLite consensus disorder prediction 618 667 - -
Gabi4507g00003 667 CDD Tudor_Agenet_AtDUF_rpt1_3 392 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4507g00003 Gabi-Chr4507 15517 21103 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4507g00003 404 532 PHD Transcription Factor Family AT5G58610 31.579 1.44e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4507g00003 - - gsj:114395106 924.85