Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4507g00002 ATGGGGTTGAGTTCTAGAGTTTTTGTCTTGTTTCTTTTGGTTTTCCTGATGTGGGTTCACGTGGATTTAGCAGAAGGTGGTAATGGCTATGGCAATGGAGGTGTTAGGAATTTCATTAGTTGGGAAGATTTGCAGGTGGATGAGCAAAGTTTGGCCTTGAAGTCCAATAACGAGGTTCGAGTTATCATGGTTGACCAACATGGTAGGGGACATTCCAAAACTGTTCAAGGAGCCGTGGATATGGTTCCAAATCAGAACAAACAAAGGGTAAAAATATACATATATCCAGGAATTTACAGAGAAAAAGTGTTTGTGCCAAATACCAAGCCTTATATATCATTTATAGGCAAAAGAAATCAAACAGCAAGTGCTGTAATTACTTGGAACAGTAAGTCATCTGACAGAGGTCCAAATGGCCAAGAATTGGGCACCTATGGTTCAGCAACTGTAGCAGTAGACTCAGATTATTTCTGTGCAACTCGTGTCACTTTTGAGAACTCAGTAGTTGCAGCACCTGGTGGAAATGGAATGCAAGCAGTGGCACTGAGGGTAAACAGTAATAGAGCCATGTTCTATCGAGTTAGGATTAAGGGAACACAGGACACTCTCTTGGACAACACAGGAACACATTACTTTTATAAATGTCACATACAAGGAAAAGTTGATTTTATCTTTGGCAGTGCAAAATCACTCTATGAGAAGTGTCGTCTTCAGTCAATAGCTGAGAATTATGGAGCAATTGCAGCACATCACAGGGATTCACCACATCAAGACACAGGATTTTCTTTTGTAGGATGCAGTATTCGAGGAACTGGAAGTGTGTACCTAGGAAGAGCATGGGGTGACTACTCAAGAATAATATACTCTAATTGTAACATGGATGATATTATTAATCCTGAAGGATGGACAGAATGGAATCATCCAGAAAGAAAAAAGACTGCAGTGTTTGGTGAGTATCAGTGCAAGGGAAGAGGAGCAGATAGAAGACGTAGGGTGCCATGGTCAAAGTCATTCAGTTATGTGGAAGCAAGACCTTTCCTTGATAGGAGGTTCATAAATGGAGAACAATGGCTCAGACTGTAG 1083 0.409 MGLSSRVFVLFLLVFLMWVHVDLAEGGNGYGNGGVRNFISWEDLQVDEQSLALKSNNEVRVIMVDQHGRGHSKTVQGAVDMVPNQNKQRVKIYIYPGIYREKVFVPNTKPYISFIGKRNQTASAVITWNSKSSDRGPNGQELGTYGSATVAVDSDYFCATRVTFENSVVAAPGGNGMQAVALRVNSNRAMFYRVRIKGTQDTLLDNTGTHYFYKCHIQGKVDFIFGSAKSLYEKCRLQSIAENYGAIAAHHRDSPHQDTGFSFVGCSIRGTGSVYLGRAWGDYSRIIYSNCNMDDIINPEGWTEWNHPERKKTAVFGEYQCKGRGADRRRRVPWSKSFSYVEARPFLDRRFINGEQWLRL 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4507g00002 360 FunFam Pectinesterase 57 360 - -
Gabi4507g00002 360 Gene3D - 60 360 IPR012334 -
Gabi4507g00002 360 SUPERFAMILY Pectin lyase-like 61 358 IPR011050 -
Gabi4507g00002 360 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 50 359 - -
Gabi4507g00002 360 Pfam Pectinesterase 62 354 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4507g00002 Gabi-Chr4507 13027 14727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4507g00002 1 312 Carbohydrate Esterase AT5G55590 53.916 3.36e-129 372
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4507g00002 K01051 - gmx:100813382 561.992