Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4503g00005 ATGAGTTCAAAATATGATTTTCTGAAGGATGTTAATCCTGCCAAGGAGGACTGGAGGATTAAGGTGAAGGTGGTTCGGACTTGGAAAGTTCCTAACTTTCAGCGTAAAAATTTGGAGGACAATCTTGAAATGGTTTTATTGGATGAACAGGGTGGTAGGATCCACGCCACTGTCAAAGACGTCATTGGTTTAATCTCAGGAATTGGGAAAGTTTGTGATCGTGTGGTTTCTGGTAGGAAGACAAAAATGGTGGTGTTGGAGCTTGACGACCTGAGGGGTCATAAGTTGGAGTGCACTTTGTGGGAGCATTATGTGGATGAGGACCAATCTTTTTTGGCAGACAACGACGATCCTCATAACGTAACTACTTGCATCACATACGGGACTATAAAGGCAATTGAGAGCAAATACAACTGGTGGTACAAGTCATGCAAAAAGTGTCCATTTTCCGTTTATGAGGATTTTGAGAAGTGGTATTGTAAGAACTGCCAAAAACATTGGGAAGATTATTATCCGAGATTTAGTGTTCAGGTCAGAGTTGTGGATAACACAGATTCCGCATCCTTTATTCTGTTTGATTGCGACTGTGTGTCTTTGTTGGGAATGAGTGCTGCTGAATTGCGCGAGCTGCATTTCAAGAGGGGTGCCGATTTGGATCAATTTCCAAATGAGTTAAATGTTCTGAATGAAAAGTCAATGTTGTTCAAGATAAATGTTAAGCAAAAGGATTTGAACACAAATAGTGAGCCCAAATATCAAGTTTCCAAAATTTGTATCAGCGAAGACATAATCTCAGCGTTCATTAAGTATCTTATAGATCCAAATGATGAAGCGAATTTCGATAATGCACGCGAAAATGAAGTTGTTTCGTCGGAACTGGAAAAGGCTGCGGTGAGCTATGAATTCGATTTAGATTCATGTTATTAA 927 0.3991 MSSKYDFLKDVNPAKEDWRIKVKVVRTWKVPNFQRKNLEDNLEMVLLDEQGGRIHATVKDVIGLISGIGKVCDRVVSGRKTKMVVLELDDLRGHKLECTLWEHYVDEDQSFLADNDDPHNVTTCITYGTIKAIESKYNWWYKSCKKCPFSVYEDFEKWYCKNCQKHWEDYYPRFSVQVRVVDNTDSASFILFDCDCVSLLGMSAAELRELHFKRGADLDQFPNELNVLNEKSMLFKINVKQKDLNTNSEPKYQVSKICISEDIISAFIKYLIDPNDEANFDNARENEVVSSELEKAAVSYEFDLDSCY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4503g00005 308 Gene3D - 106 266 IPR012340 -
Gabi4503g00005 308 Gene3D - 5 62 IPR012340 -
Gabi4503g00005 308 Pfam Replication factor-A C terminal domain 126 257 IPR013955 -
Gabi4503g00005 308 SUPERFAMILY Nucleic acid-binding proteins 6 59 IPR012340 -
Gabi4503g00005 308 PANTHER OS03G0429900 PROTEIN 129 259 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Gabi4503g00005 308 SUPERFAMILY Nucleic acid-binding proteins 122 259 IPR012340 -
Gabi4503g00005 308 CDD RPA1_DBD_C 124 273 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4503g00005 Gabi-Chr4503 79182 85447 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4503g00005 126 258 Core DNA Replication Machinery Family AT5G08020 26.866 6.64e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4503g00005 - - aip:110264975 144.436