Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4500g00062 ATGTCTGACTCACACCTGACTTTCTGTTTTCTTTCTTCAATTCTTGCTCTTATTGTAATTTTCATTCTCATCAAAAGAAAGAAACCAAGGCTTAATCTTCCCCCTGGCAAAATGGGATGGCCCTTTCTTGGAGAAACTCTTGGGTATTTGAAACCTTATTCTGCTACTACAATAGGAGACTTTATGGAAAAGCACATAGCAAGGTATGGTACAATTTACAAGTCACAATTATTTGGTGAACCAGCTATAGTGTCAGCAGATGCAGGGCTTAATAGGTTCATATTGCAAAACGAAGGGAAGTTATTTGAGTGCAGCTATCCTAGAAGCATTGGGGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCATAGGGACATGAGGAATATATCACTGAACTTTCTCAGCTATGCTAGGCTTCGAACACATCTATTGAAAGAGGTTGAGAAGCATACCCTTATAGTTCTAAACTCGTGGAAGGAAAATAGTACATTCTCAGCTCAAGATGAAGCAAAGAAGTTCACCTTCAATTTGATGGCGAAACATATCATGAGCTTGGATCCAGGGAATCTAGAGACAGAACAATTAAAGAAAGAGTATATCTCTTTCATGAAGGGTGTGGTTTCTGCTCCTTTGAATTTTCCCGGAACTGCATACTGGAAAGCATTAAAGTCTAGGTCCACTATACTGAAGTTCATAGAGAGGAAAATGGAAGAAAGAGTCAAGAGAAACCAAGTGGGAAAGGAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGATGCATTCAAATCTTTCAACCGAGCAAATTCTTGACTTGGTTCTGAGCTTGCTTTTTGCTGGCCATGAAACTTCATCCGTAGCCATAGCTCTAGCTATTTACCTCTTACCTAGTTGTCCTCGAGCTATACAACAATTAAGGGAAGAACATGGAGAAATAGTCAAATTGAAGAAGCAAGCAGGGGAGGTTGAATTGACTTGGGATGATTACAAAAGAATGGAATTTACAAACTGTGTTGTGAACGAAACACTTCGGCTGGGAAATGTTGTGCGGTTCCTTCATAGGAAGGCTCTCAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCAGTGATTTCAGCGGTGCATTTGGATCCTGCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGGTGCAGGGCAATAGTAAAAGTGGAAGTTGCTCAAACACAAGCAATAACTTCATGCCATTCGGGGGAGGACCAAGACTGTGTGCGGGTTCAGAATTAGCAAAACTTGAAATGGCTGTTTTCATCCACCATCTCATCCTCAACTACCAATGGGAACTGGTCGATTCCGATCAACCTATTGCATACCCTTTTGTTGATTTTCCCAAAGGTCTATTAATCAGAGTCCAAAGCCACTCTTTGATATGA 1455 0.4103 MSDSHLTFCFLSSILALIVIFILIKRKKPRLNLPPGKMGWPFLGETLGYLKPYSATTIGDFMEKHIARYGTIYKSQLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFLSYARLRTHLLKEVEKHTLIVLNSWKENSTFSAQDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYISFMKGVVSAPLNFPGTAYWKALKSRSTILKFIERKMEERVKRNQVGKESLEEDDLLNWVLMHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYLLPSCPRAIQQLREEHGEIVKLKKQAGEVELTWDDYKRMEFTNCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPRGWKVLPVISAVHLDPALFDQPQHFNPWRWQVQGNSKSGSCSNTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNYQWELVDSDQPIAYPFVDFPKGLLIRVQSHSLI 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4500g00062 484 CDD CYP90-like 65 478 - -
Gabi4500g00062 484 SUPERFAMILY Cytochrome P450 30 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 Pfam Cytochrome P450 34 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 FunFam Cytochrome P450 90B1 23 480 - -
Gabi4500g00062 484 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Gabi4500g00062 484 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PANTHER CYTOCHROME P450 26 29 462 - -
Gabi4500g00062 484 Gene3D Cytochrome P450 23 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00062 484 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4500g00062 Gabi-Chr4500 819916 824410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4500g00062 25 410 Cytochrome P450 AT3G50660 74.755 0.0 635