Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4500g00061 ATGTCTGACTCACACCTGACTTTCTGTTTTCTTTCTTCAATTCTTGCTCTTATTGTAATTTTCATTCTCATCAAAAGAAAGAAACCAAGGCTTAATCTTCCCCCTGGCAAAATGGGATGGCCCTTTCTTGGAGAAACTCTTGGGTATTTGAAACCTTATTCTGCTACTACAATAGGAGACTTTATGGAAAAGCACATAGCAAGGTATGGTACAATTTACAAGTCACAATTATTTGGTGAACCAGCTATAGTGTCAGCAGATGCAGGGCTTAATAGGTTCATATTGCAAAACGAAGGGAAGTTATTTGAGTGCAGCTATCCTAGAAGCATTGGGGGAATACTTGGGAAATGGTCTATGTTGGTCTTAGTAGGGGACATGCATAGGGACATGAGGAATATATCACTGAACTTTCTCAGCTATGCTAGGCTTCGAACACATCTATTGAAAGAGGTTGAGAAGCATACCCTTATAGTTCTAAACTCGTGGAAGGAAAATAGTACATTCTCAGCTCAAGATGAAGCAAAGAAGTTCACCTTCAATTTGATGGCGAAACATATCATGAGCTTGGATCCAGGGAATCTAGAGACAGAACAATTAAAGAAAGAGTATATCTCTTTCATGAAGGGTGTGGTTTCTGCTCCTTTGAATTTTCCCGGAACTGCATACTGGAAAGCATTAAAGTCTAGGTCCACTATACTGAAGTTCATAGAGAGGAAAATGGAAGAAAGAGTCAAGAGAAACCAAGTGGGAAAGGAAAGTTTGGAGGAAGATGATCTTCTAAACTGGGTTTTGATGCATTCAAATCTTTCAACCGAGCAAATTCTTGACTTGGTTCTGAGCTTGCTTTTTGCTGGCCATGAAACTTCATCCGTAGCCATAGCTCTAGCTATTTACCTCTTACCTAGTTGTCCTCGAGCTATACAACAATTAAGGGAAGAACATGGAGAAATAGTCAAATTGAAGAAGCAAGCAGGGGAGGTTGAATTGACTTGGGATGATTACAAAAGAATGGAATTTACAAACTGTGTTGTGAACGAAACACTTCGGCTGGGAAATGTTGTGCGGTTCCTTCATAGGAAGGCTCTCAAAGATGTTCGGTACAAAGGTTATGACATTCCACGTGGGTGGAAAGTCCTTCCAGTGATTTCAGCGGTGCATTTGGATCCTGCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGGGCAATAGTAAAAGTGGAAGTTGCTCAAACACAAGCAATAACTTCATGCCATTCGGGGGAGGACCAAGACTGTGTGCGGGTTCAGAATTAGCAAAACTTGAAATGGCTGTTTTCATCCACCATCTCATCCTCAACTACCAATGGGAACTGGTCGATTCCGATCAACCTATTGCATACCCTTTTGTTGATTTTCCCAAAGGTCTATTAATCAGAGTCCAAAGCCACTCTTTGATATGA 1449 0.4092 MSDSHLTFCFLSSILALIVIFILIKRKKPRLNLPPGKMGWPFLGETLGYLKPYSATTIGDFMEKHIARYGTIYKSQLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRNISLNFLSYARLRTHLLKEVEKHTLIVLNSWKENSTFSAQDEAKKFTFNLMAKHIMSLDPGNLETEQLKKEYISFMKGVVSAPLNFPGTAYWKALKSRSTILKFIERKMEERVKRNQVGKESLEEDDLLNWVLMHSNLSTEQILDLVLSLLFAGHETSSVAIALAIYLLPSCPRAIQQLREEHGEIVKLKKQAGEVELTWDDYKRMEFTNCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPRGWKVLPVISAVHLDPALFDQPQHFNPWRWQGNSKSGSCSNTSNNFMPFGGGPRLCAGSELAKLEMAVFIHHLILNYQWELVDSDQPIAYPFVDFPKGLLIRVQSHSLI 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4500g00061 482 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 422 431 IPR017972 GO:0005506|GO:0016705
Gabi4500g00061 482 Gene3D Cytochrome P450 23 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS P450 superfamily signature 420 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS P450 superfamily signature 429 440 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS P450 superfamily signature 284 301 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS P450 superfamily signature 342 353 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 FunFam Cytochrome P450 90B1 23 478 - -
Gabi4500g00061 482 SUPERFAMILY Cytochrome P450 30 475 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PANTHER CYTOCHROME P450 26 29 460 - -
Gabi4500g00061 482 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 293 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 381 405 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 273 290 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 341 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 429 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 PRINTS E-class P450 group I signature 419 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 Pfam Cytochrome P450 34 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4500g00061 482 CDD CYP90-like 65 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4500g00061 Gabi-Chr4500 819916 824410 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4500g00061 25 408 Cytochrome P450 AT3G50660 74.631 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4500g00061 K09587 - gmx:100789515 836.639