Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4500g00037 ATGGATAAGCTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTAGGATCACGTTCTTCATCCAGCACTGGTAAGGGGAAATGTCATGAAGGCTCAATAAAGTATGGTTTCAGCCTAGTGAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGATAAAGAATTGGGTTTATTTGCTATTTATGATGGTCACCTGGGAGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTTTAAGGGAGGAATTTTGGGATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCAATTCTATCTAATAGTTCTGATTTGGGGCGTGGTGGATCAACGGCTGTAACTGCAATATTGATCAATGGCCGAAGGTTATGGGTAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGCCAAGCAGTTCAAATGACTACAGATCATGAGCCCAACACAGAACGAGGCAGCATTGAGACTAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGGCAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACAGAATACTGATATAGATGTTGATACTGATATTCTTATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATGTTGCTACAAGAATGAGAGATCCACAGAAAGCAGCTAAGCAACTAACGGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGCATTGTGGTTCAATTCAGGTGA 846 0.4208 MDKLCCFKSSYSQLVGSRSSSSTGKGKCHEGSIKYGFSLVKGRANHPMEDYHVAKFVQIQDKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEFWDDPTLSISKAYESTDQAILSNSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIETKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDIDVDTDILILASDGLWKVMANQEAVDVATRMRDPQKAAKQLTAEALKRDSKDDISCIVVQFR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4500g00037 281 SMART PP2C_4 30 278 IPR001932 -
Gabi4500g00037 281 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Gabi4500g00037 281 PANTHER PROTEIN PHOSPHATASE 25 280 IPR015655 GO:0004722|GO:0006470
Gabi4500g00037 281 CDD PP2Cc 33 280 IPR001932 -
Gabi4500g00037 281 FunFam Probable protein phosphatase 2C 39 26 281 - -
Gabi4500g00037 281 SUPERFAMILY PP2C-like 32 280 IPR036457 -
Gabi4500g00037 281 Gene3D - 29 281 IPR036457 -
Gabi4500g00037 281 SMART PP2C_SIG_2 45 280 IPR001932 -
Gabi4500g00037 281 Pfam Protein phosphatase 2C 43 273 IPR001932 -
Gabi4500g00037 281 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4500g00037 Gabi-Chr4500 500957 504470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4500g00037 1 281 PP2C-type Phosphatase Gene Family AT1G22280 73.264 2.95e-155 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4500g00037 K17506 - gmx:100797292 500.745