Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4500g00035 ATGGATAAGCTATGCTGTTTTAAGTCTTCCTACTCTCAGCTTGTAGGATCACGTTCTTCATCCAGCACTGGTAAGGGGAAATGTCATGAAGGCTCAATAAAGTATGGTTTCAGCCTAGTGAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGATAAAGAATTGGGTTTATTTGCTATTTATGATGGTCACCTGGGAGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTTTAAGGGAGGAGGAATTTTGGGATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCAATTCTATCTAATAGTTCTGATTTGGGGCGTGGTGGATCAACGGCTGTAACTGCAATATTGATCAATGGCCGAAGGTTATGGGTAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGCCAAGCAGTTCAAATGACTACAGATCATGAGCCCAACACAGAACGAGGCAGCATTGAGACTAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGGCAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACAGAATACTGATATAGATGTTGATACTGATATTCTTATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATGTTGCTACAAGAATGAGAGATCCACAGAAAGCAGCTAAGCAACTAACGGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGCATTGTGGTTCAATTCAGGTAA 849 0.4205 MDKLCCFKSSYSQLVGSRSSSSTGKGKCHEGSIKYGFSLVKGRANHPMEDYHVAKFVQIQDKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWDDPTLSISKAYESTDQAILSNSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIETKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDIDVDTDILILASDGLWKVMANQEAVDVATRMRDPQKAAKQLTAEALKRDSKDDISCIVVQFR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4500g00035 282 Gene3D - 29 282 IPR036457 -
Gabi4500g00035 282 Pfam Protein phosphatase 2C 43 274 IPR001932 -
Gabi4500g00035 282 SUPERFAMILY PP2C-like 32 281 IPR036457 -
Gabi4500g00035 282 SMART PP2C_SIG_2 45 281 IPR001932 -
Gabi4500g00035 282 PANTHER PROTEIN PHOSPHATASE 25 281 IPR015655 GO:0004722|GO:0006470
Gabi4500g00035 282 MobiDBLite consensus disorder prediction 156 177 - -
Gabi4500g00035 282 CDD PP2Cc 33 281 IPR001932 -
Gabi4500g00035 282 SMART PP2C_4 30 279 IPR001932 -
Gabi4500g00035 282 FunFam Probable protein phosphatase 2C 39 26 282 - -
Gabi4500g00035 282 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4500g00035 Gabi-Chr4500 500957 504731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4500g00035 1 282 PP2C-type Phosphatase Gene Family AT1G22280 73.264 4.65e-155 432