Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4500g00034 ATGTTCCGCTCAATAAAGTATGGTTTCAGCCTAGTGAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCAGATACAGGATAAAGAATTGGGTTTATTTGCTATTTATGATGGTCACCTGGGAGACCGTGTACCTGCCTACTTACAGAAACATTTGTTTACCAACATTTTAAGGGAGGAGGAATTTTGGGATGACCCCACTCTTTCTATCTCAAAAGCATATGAGAGCACAGATCAGGCAATTCTATCTAATAGTTCTGATTTGGGGCGTGGTGGATCAACGGCTGTAACTGCAATATTGATCAATGGCCGAAGGTTATGGGTAGCTAATGTTGGAGACTCACGAGCTGTTCTTTCAAGAAAAGGCCAAGCAGTTCAAATGACTACAGATCATGAGCCCAACACAGAACGAGGCAGCATTGAGACTAAAGGTGGTTTTGTCTCCAACTTACCAGGTGATGTGCCTAGAGTAAATGGGCAACTTGCTGTTTCTCGTGCATTTGGAGACAAGAGCCTCAAGTCACATTTGCGGTCAGACCCTGATGTACAGAATACTGATATAGATGTTGATACTGATATTCTTATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGATGTTGCTACAAGAATGAGAGATCCACAGAAAGCAGCTAAGCAACTAACGGCTGAAGCATTAAAAAGAGACAGTAAAGATGATATATCTTGCATTGTGGTTCAATTCAGGTGA 765 0.4209 MFRSIKYGFSLVKGRANHPMEDYHVAKFVQIQDKELGLFAIYDGHLGDRVPAYLQKHLFTNILREEEFWDDPTLSISKAYESTDQAILSNSSDLGRGGSTAVTAILINGRRLWVANVGDSRAVLSRKGQAVQMTTDHEPNTERGSIETKGGFVSNLPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQNTDIDVDTDILILASDGLWKVMANQEAVDVATRMRDPQKAAKQLTAEALKRDSKDDISCIVVQFR 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4500g00034 254 SMART PP2C_4 2 251 IPR001932 -
Gabi4500g00034 254 FunFam Probable protein phosphatase 2C 39 1 254 - -
Gabi4500g00034 254 Pfam Protein phosphatase 2C 15 246 IPR001932 -
Gabi4500g00034 254 ProSiteProfiles PPM-type phosphatase domain profile. 6 253 IPR001932 -
Gabi4500g00034 254 Gene3D - 2 254 IPR036457 -
Gabi4500g00034 254 CDD PP2Cc 5 253 IPR001932 -
Gabi4500g00034 254 SUPERFAMILY PP2C-like 4 253 IPR036457 -
Gabi4500g00034 254 PANTHER PROTEIN PHOSPHATASE 7 253 IPR015655 GO:0004722|GO:0006470
Gabi4500g00034 254 SMART PP2C_SIG_2 17 253 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4500g00034 Gabi-Chr4500 492660 504470 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4500g00034 5 254 PP2C-type Phosphatase Gene Family AT1G22280 75.781 1.51e-148 414
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4500g00034 K17506 - gmx:100797292 465.307