Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4499g00009 AACGTTGAAACAAACATGGTGTTTCTAAAAGCCATACTCATTTTCTTCATAACCGCCGTCAACGGCCTTGGCTCCGCCGCCACCATCGCCGTCACCTACGGCACCGCCACCGTCTGCGGCATAGTTGCCGGGGAGAAAAACCAGCATATCCAATGCTACCAAAAGGGGAAACGTGTTCCGGTGATCCTTCCAAACGTTTCCTTCGAGGCAATCTCCGGTGGCCGGAGCTTCTTCTGCGGCCTCAGGTCCGGTGGCTTCAGCCTCCATTGTTGGGACACCAATGTGTCAAGCTTGGTGTCCAAACCCAGAAGGTTGTTTCACAGTGATGTGGTTCAGTTGAGTGATGTAGCAGTTGGTGATACTCAGGTTTGTGCCAGAGAGTTGCATTCTGGTGTGGCAAGGTGTTGGAGAGGAGGTGGGGGAAATGGTGATGAGTTTCCTTCACCTGGTGAAGGGTTTAGGTTTAGGACCATCACTTCTGGGTCTGGTTTTTCTTGTGGGGTTTTGAAGGAGAACAATAAGGTTTTGTGTTGGGGTGAGGGTGGGAACATTATTGGTCATGAGATTCAGAAACTGTTTGGTAATTTGTCAATGTCAAGTTTAGTTGCTGGAGTTTCTCATGTTTGTGGATTGACCCTTAATGGGGTTTTGGTTTGTAGAGGAAACAACAATGGTTCTTCTAGTCAATTTGGTGTTATTGTTCCTTTCAGTTCAGCTTCAGGGTTTTCAGGTCTTGCTTTGGGAGAAGATTTTTCTTGTGCTATTAGGAGCACAAATGGATTTGTTGTGTGCTGGGGTGGTGTCAATGGGTTTGATTTTGATAGTGATGTGATAAAGGGTGTTTCTTTTGAGTCATTAGTTGCTGGTTTGGATTTTGTTTGTGGGTTGACAACTAGGAATTTGTCTCTGATTTGTTGGGGTCCTGGTTGGTCTTCTAAGCTTCATTTGCCTAGTAGTGATCTTCCATTGGGAATGATTCTTCCAGGTCCATGTGTTATTGATGCTTGTAGTTCTTGTGGTACATATCCTAATTCTGATATGCTATGTCATGGGTCTGGAACTATTTGCTATTCATGCAAGACTGAGTTTCCACTTGCTTTGCCATTGCCACCACCACCATCATCATCACAAGTTCCAAAGCAACAGTCTTCTTCAGCTAAAGAGAAAAACTTAAGGGAATGGTTGGTATTTCTGGTTGTTGGATCAGTTGGGGCTTTTGCAGGTCTATGCACAATTCTTTATTTCTTTTGGATTGGAGCAAGAAGATGCTTGAAGACAAAAGTTGATAATTCTGTGCAACCCACAAGCAATGAGTCTGATTCCTATGTGGATATAGTTCCCATGCCTAATCAAGGTTCTAATGGCACAACATTAAGATCTTTTTCTAGCAGAAGGCAGAGCTCAATAAGATTGAGGAGACATAGGAGTGGTTCATCATCAAAGCGTGTAGACAGGACTGAGAGTTTCTCATTACGTGAACTAGCCATAGCCACAAACAACTTCTCAGTAGATAATAAGATAGGTGCTGGTAGCTTTGGCAGTGTTTACAAAGGCAAGCTAGCTGATGGTCGTGATGTAGCCATTAAAAGAGGAGATACCAGCACTAAGAAGAAGAAATTCCAGGAAAAAGAAATTGCTTTTGATTCTGAATTGGCATTGTTGTCCCGGCTTCACCACAAGCATTTGGTGAAGCTAATTGGATTCTGCGAGGAAAATGATGAGATGCTTTTGGTTTATGAGTACATGATCAATGGGTCACTCTATGATCATTTGCATGACAAGAAAAACACTGAAAAAAGTAGCAGCATTTTGAATTCTTGGAAGATGAGAATCAAGATTGCATTAGGTGCTGCTAGGGGAATTGAGTATCTTCACAACTATGCTGTTCCATCCATTATTCACCGAGATATTAAGTCCTCAAATATACTCTTGGATTCAAATTGGAATGCTAGAGTTTCTGATTTTGGATTGTCACTAATTTGGCCTGAGACTGAGCTCGAATTGATGTCTACCAAAGCAGTTGGAACTGTTGGATACATAGACCCTGAGTACTATGTCTTGAATGTGTTAACAACAAAAAGTGATGTTTATGGTTTAGGAGTGGTGTTGTTAGAGCTTCTGACAGGAAAAAGAGCTGTGTTCAAAACTGAAGAAGGGTCAAGCCCAATTGGAGTGGTGGAATACACAAGGCCAAGGATAGCAGCAGGAGAGTTGTGGAATGTGTTGGATTATAGAGTTGGACAACCAGAAGTGAATGAGGTTGAGTCTCTTGAGCTCATGGCTTACACTGCTATGCATTGTGTGAACTTGGAGGGAAAGGAAAGGCCTGACATGACTGACATTGTTGCTAACTTGGAGAGGGCATTGACTTTTGTTGAGGGTAGCCCTGGTACCCTCTCCATAACTTCATTCTCTGCCCCACTTGAATGA 2430 0.4309 NVETNMVFLKAILIFFITAVNGLGSAATIAVTYGTATVCGIVAGEKNQHIQCYQKGKRVPVILPNVSFEAISGGRSFFCGLRSGGFSLHCWDTNVSSLVSKPRRLFHSDVVQLSDVAVGDTQVCARELHSGVARCWRGGGGNGDEFPSPGEGFRFRTITSGSGFSCGVLKENNKVLCWGEGGNIIGHEIQKLFGNLSMSSLVAGVSHVCGLTLNGVLVCRGNNNGSSSQFGVIVPFSSASGFSGLALGEDFSCAIRSTNGFVVCWGGVNGFDFDSDVIKGVSFESLVAGLDFVCGLTTRNLSLICWGPGWSSKLHLPSSDLPLGMILPGPCVIDACSSCGTYPNSDMLCHGSGTICYSCKTEFPLALPLPPPPSSSQVPKQQSSSAKEKNLREWLVFLVVGSVGAFAGLCTILYFFWIGARRCLKTKVDNSVQPTSNESDSYVDIVPMPNQGSNGTTLRSFSSRRQSSIRLRRHRSGSSSKRVDRTESFSLRELAIATNNFSVDNKIGAGSFGSVYKGKLADGRDVAIKRGDTSTKKKKFQEKEIAFDSELALLSRLHHKHLVKLIGFCEENDEMLLVYEYMINGSLYDHLHDKKNTEKSSSILNSWKMRIKIALGAARGIEYLHNYAVPSIIHRDIKSSNILLDSNWNARVSDFGLSLIWPETELELMSTKAVGTVGYIDPEYYVLNVLTTKSDVYGLGVVLLELLTGKRAVFKTEEGSSPIGVVEYTRPRIAAGELWNVLDYRVGQPEVNEVESLELMAYTAMHCVNLEGKERPDMTDIVANLERALTFVEGSPGTLSITSFSAPLE 809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4499g00009 809 ProSiteProfiles Protein kinase domain profile. 501 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4499g00009 809 MobiDBLite consensus disorder prediction 429 484 - -
Gabi4499g00009 809 SUPERFAMILY RCC1/BLIP-II 111 344 IPR009091 -
Gabi4499g00009 809 ProSitePatterns Protein kinases ATP-binding region signature. 507 529 IPR017441 GO:0005524
Gabi4499g00009 809 Gene3D Transferase(Phosphotransferase) domain 1 582 793 - -
Gabi4499g00009 809 Gene3D Phosphorylase Kinase; domain 1 462 581 - -
Gabi4499g00009 809 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN CCR4 197 794 IPR044815 GO:0004674
Gabi4499g00009 809 FunFam Serine/threonine-protein kinase-like protein CCR4 582 799 - -
Gabi4499g00009 809 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Gabi4499g00009 809 Gene3D - 190 358 IPR009091 -
Gabi4499g00009 809 Gene3D - 17 189 IPR009091 -
Gabi4499g00009 809 CDD STKc_IRAK 507 787 - -
Gabi4499g00009 809 MobiDBLite consensus disorder prediction 429 465 - -
Gabi4499g00009 809 FunFam receptor-like protein kinase FERONIA 463 581 - -
Gabi4499g00009 809 SMART serkin_6 501 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4499g00009 809 Pfam Protein kinase domain 502 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4499g00009 809 SUPERFAMILY Protein kinase-like (PK-like) 479 785 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4499g00009 Gabi-Chr4499 51604 62629 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4499g00009 7 800 Receptor kinase-like Gene Family AT3G55950 52.457 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Gabi4499g00009 Pkinase 2.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4499g00009 - - gmx:100776682 1139.41