Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4494g00004 ATGTTTCATTTTCTTAGCAGGAGCGTTTTTCCAACCACAAGAAAACTGGTTCTGTTGCAAAACCAAAACTACCAGCAATGGATTTCATTGAAATTCATCTCCACCCCTTCAAAAGGAAACTCTTTTACAGCATCATACCTCATTGACACTTGTGGGTTATCACCGCAGCGTGCTGCTTCGTTTTCCAAACGCATGAAATTCGAAACCCGTGAAAAACCAGACCTTGTGTTTGAGTTCTTCAAGAACCAGGGTTTCTCACAAACCATGGCCTTAATTATCATCCAATCTTTCCCAGGGATCCTTCGATCTGATCCCATTAAAACTTTGCTTCCAAAGATTGATTTTTTGAAGTCCAAAGGTTTTTCTAACTCTGACATATACAGCATCATAAGGGCTTGCCCTTCCATCCTCAATAGAAGCTTGCACAGAGAAATTATTCCCTGTTTTGATTTCTTCAACAACTTGTTTCATTGTAAGCACAAGTTCATGAAAACTATAAAACGTTATTCCGGTATTCTTGTTGACCTTGAGAACTGTTCAGAACTAAATATCAAAGTGCTGAGGGAAGGAGGAGTTCCTGAATCACATATTATAAGGTTTATAGAATACTTCCCTCGCACATTGAAGTTTCCTCATAAGCGGTTCAAGGAGTTAGTTCAGGAAGTGAAGGAATTGGGGTTTGATCCTTTGAAGTTGCAATTTGTTGTAGTTGTTCATATAAAGCTATGCATAAGCAAATCCACATGGGCAAGGAAGGAAGGTGTTTATAGAAAGTGGGGTTGGACTGATGATGATATTAGTGCAACATTTAGAGTCTTTCCATTTTTTATTTCGGTTTCAGACAAAAAGATTGATGCTGTCATGGATTTTCTGGTGAACAGATTGGGCTACAAGTCTGCTGATATTGCTAGGTGTCCAGCGGTAATGTCTATGAGCTTGGGAAACCGAATTATTCCAAGAGGTTCTGTTGTTCTAGTTTTGTTGTCAAAGGGTCTGGTGAGCAAGCTGAGCCTGGGTGCAATATTTAAGTGTAATGAAAAGGTCTTCTTAGACAAGTTTATCTCTTGTCATGAGAAGGAAGCTGATGAGCTGTTGAAGTTGTATCGAGCTAAATTGACTCTTACAGGGTGA 1131 0.3935 MFHFLSRSVFPTTRKLVLLQNQNYQQWISLKFISTPSKGNSFTASYLIDTCGLSPQRAASFSKRMKFETREKPDLVFEFFKNQGFSQTMALIIIQSFPGILRSDPIKTLLPKIDFLKSKGFSNSDIYSIIRACPSILNRSLHREIIPCFDFFNNLFHCKHKFMKTIKRYSGILVDLENCSELNIKVLREGGVPESHIIRFIEYFPRTLKFPHKRFKELVQEVKELGFDPLKLQFVVVVHIKLCISKSTWARKEGVYRKWGWTDDDISATFRVFPFFISVSDKKIDAVMDFLVNRLGYKSADIARCPAVMSMSLGNRIIPRGSVVLVLLSKGLVSKLSLGAIFKCNEKVFLDKFISCHEKEADELLKLYRAKLTLTG 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4494g00004 376 Pfam mTERF 78 229 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 Pfam mTERF 205 350 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 Gene3D Transcription termination factor 3, mitochondrial 172 367 IPR038538 -
Gabi4494g00004 376 SMART mt_12 91 122 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 SMART mt_12 127 159 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 SMART mt_12 198 228 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 SMART mt_12 299 333 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 SMART mt_12 267 298 IPR003690 GO:0003690|GO:0006355
Gabi4494g00004 376 FunFam Mitochondrial transcription termination factor-like 141 361 - -
Gabi4494g00004 376 PANTHER CGI-12 PROTEIN-RELATED 38 359 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4494g00004 Gabi-Chr4494 20369 21896 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Gabi4494g00004 mTERF 6.1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4494g00004 K15031 - qsa:O6P43_003531 328.946