Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4491g00011 ATGGCGTCACAAGCAGAATCGCAGCATCCCAGAAAGGCTTTCGGATGGGCAGCTAGAGATTCATCTGGTGTTCTTTCCCCTTTCAACTTCTCCAGAAGGGAAACGGGGGAGAAAGATGTGACATTCAAAGTGCTGTATTGTGGGATATGCCACTCGGACCTCCACATGCTGAAGAACGAGTGGGGCAATTCCATCTACCCTCTAGTACCTGGGCATGAGATTGCTGGTGTAGTGACAGAGGTGGGAAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGTATGGTTGGATCCTGCAACTCATGCCAAAGCTGTGCAGATGATCTTGAGAACTACTGCCCAAAAATGATTCTCACATACGCTGCCAAGTATGTTGATGGCACCATCACATACGGAGGCTACTCTGACACGATGGTTGCAGACGAACACTTTGTTATCCGCATTCCAGATGGCATGCCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTTTAAGATATTTTGAACTTGACAAGCCTGGTCTACACGTGGGTGTGGTTGGTCTTGGTGGGCTAGGTCATATGGCTGTGAAGTTTGCCAAAGCTCTTGGAGCTAAGGTGACAGTAATTAGTACATCCCCTAACAAACAGAAAGAGGCTATTGAACAATTAGGAGCTGACTCATTTGTGGTTAGCCGGGAGCAAGATCAGATGCAGGTACGTGCTGCAATGGGTTCCTTGGATGGTATCATTGATACTGTTTCAGCAGTCCATCCTCTCTTTCCTTTGATTGGTCTGTTGAAGAATCATGGTAAACTTGTCATGGTTGGTGCACCGGAGAAGCCTCTGGAGCTGCCGGTATTTCCTTTACTTATGGGGCGAAAGATTGTCGGTGGCAGTTGCATTGGAGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACACAATGTGAAACCTGAGATTGAGGTTATTCCAATAGATTATGTGAACACTGCAATGGAGCGCCTACTCAAAGCAGATGTGAAATATCGATTTGTTATTGACATAGGAAACACGCTGAAAGCAAGCTCTTGA 1092 0.4661 MASQAESQHPRKAFGWAARDSSGVLSPFNFSRRETGEKDVTFKVLYCGICHSDLHMLKNEWGNSIYPLVPGHEIAGVVTEVGSKVQKFKVGDKVGVGCMVGSCNSCQSCADDLENYCPKMILTYAAKYVDGTITYGGYSDTMVADEHFVIRIPDGMPLDAAAPLLCAGITVYSPLRYFELDKPGLHVGVVGLGGLGHMAVKFAKALGAKVTVISTSPNKQKEAIEQLGADSFVVSREQDQMQVRAAMGSLDGIIDTVSAVHPLFPLIGLLKNHGKLVMVGAPEKPLELPVFPLLMGRKIVGGSCIGGMKETQEMIDFAAKHNVKPEIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKASS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4491g00011 363 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gabi4491g00011 363 SUPERFAMILY GroES-like 20 184 IPR011032 -
Gabi4491g00011 363 PANTHER ALDEHYDE REDUCTASE 6 358 IPR047109 GO:0016616
Gabi4491g00011 363 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 324 IPR036291 -
Gabi4491g00011 363 SMART PKS_ER_names_mod 23 353 IPR020843 GO:0016491
Gabi4491g00011 363 CDD CAD1 14 354 IPR047109 GO:0016616
Gabi4491g00011 363 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gabi4491g00011 363 Gene3D - 167 325 - -
Gabi4491g00011 363 FunFam Uncharacterized protein 16 166 - -
Gabi4491g00011 363 Pfam Zinc-binding dehydrogenase 194 319 IPR013149 -
Gabi4491g00011 363 FunFam Cinnamyl alcohol dehydrogenase 167 325 - -
Gabi4491g00011 363 FunFam Putative cinnamyl alcohol dehydrogenase 6 326 355 - -
Gabi4491g00011 363 Gene3D - 16 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4491g00011 Gabi-Chr4491 62531 65579 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4491g00011 11 360 Monolignol Biosynthesis Gene Families AT4G37990 73.714 7.33e-178 496
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4491g00011 K23232 - mnt:21385910 633.254