Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4491g00010 ATGGCGTCACAAGCAGAATCGCAGCATCCCAGAAAGGCTTTCGGATGGGCAGCTAGAGATTCATCTGGTGTTCTTTCCCCTTTCAACTTCTCCAGAAGGGAAACGGGGGAGAAAGATGTGACATTCAAAGTGCTGTATTGTGGGATATGCCACTCGGACCTCCACATGCTGAAGAACGAGTGGGGCAATTCCATCTACCCTCTAGTACCTGGGCATGAGATTGCTGGTGTAGTGACAGAGGTGGGAAGCAAGGTGCAAAAGTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGTATGGTTGGATCCTGCAACTCATGCCAAAGCTGTGCAGATGATCTTGAGAACTACTGCCCAAAAATGATTCTCACATACGCTGCCAAGTATGTTGATGGCACCATCACATACGGAGGCTACTCTGACACGATGGTTGCAGACGAACACTTTGTTATCCGCATTCCAGATGGCATGCCACTTGATGCTGCTGCACCTCTCCTTTGTGCTGGGATCACAGTGTATAGCCCTTTAAGATATTTTGAACTTGACAAGCCTGGTCTACACGTGGGTGTGGTTGGTCTTGGTGGGCTAGGTCATATGGCTGTGAAGTTTGCCAAAGCTCTTGGAGCTAAGGTGACAGTAATTAGTACATCCCCTAACAAACAGAAAGAGGCTATTGAACAATTAGGAGCTGACTCATTTGTGGTTAGCCGGGAGCAAGATCAGATGCAGGCTGCAATGGGTTCCTTGGATGGTATCATTGATACTGTTTCAGCAGTCCATCCTCTCTTTCCTTTGATTGGTCTGTTGAAGAATCATGGTAAACTTGTCATGGTTGGTGCACCGGAGAAGCCTCTGGAGCTGCCGGTATTTCCTTTACTTATGGGTAAGCATTCCATATTATTGGCAGGGCGAAAGATTGTCGGTGGCAGTTGCATTGGAGGGATGAAGGAGACACAAGAAATGATTGATTTTGCTGCTAAACACAATGTGAAACCTGAGATTGAGGTTATTCCAATAGATTATGTGAACACTGCAATGGAGCGCCTACTCAAAGCAGATGTGAAATATCGATTTGTTATTGACATAGGAAACACGCTGAAAGCAAGCTCTTGA 1110 0.464 MASQAESQHPRKAFGWAARDSSGVLSPFNFSRRETGEKDVTFKVLYCGICHSDLHMLKNEWGNSIYPLVPGHEIAGVVTEVGSKVQKFKVGDKVGVGCMVGSCNSCQSCADDLENYCPKMILTYAAKYVDGTITYGGYSDTMVADEHFVIRIPDGMPLDAAAPLLCAGITVYSPLRYFELDKPGLHVGVVGLGGLGHMAVKFAKALGAKVTVISTSPNKQKEAIEQLGADSFVVSREQDQMQAAMGSLDGIIDTVSAVHPLFPLIGLLKNHGKLVMVGAPEKPLELPVFPLLMGKHSILLAGRKIVGGSCIGGMKETQEMIDFAAKHNVKPEIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKASS 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4491g00010 369 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Gabi4491g00010 369 SUPERFAMILY GroES-like 20 184 IPR011032 -
Gabi4491g00010 369 FunFam Cinnamyl alcohol dehydrogenase 167 331 - -
Gabi4491g00010 369 PANTHER ALDEHYDE REDUCTASE 6 364 IPR047109 GO:0016616
Gabi4491g00010 369 FunFam Putative cinnamyl alcohol dehydrogenase 6 332 361 - -
Gabi4491g00010 369 Gene3D - 16 361 - -
Gabi4491g00010 369 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Gabi4491g00010 369 FunFam Uncharacterized protein 16 166 - -
Gabi4491g00010 369 SMART PKS_ER_names_mod 23 359 IPR020843 GO:0016491
Gabi4491g00010 369 Pfam Zinc-binding dehydrogenase 194 324 IPR013149 -
Gabi4491g00010 369 CDD CAD1 14 360 IPR047109 GO:0016616
Gabi4491g00010 369 Gene3D - 167 331 - -
Gabi4491g00010 369 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 330 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4491g00010 Gabi-Chr4491 62529 65581 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4491g00010 11 366 Monolignol Biosynthesis Gene Families AT4G37990 72.191 8.29e-176 491
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4491g00010 K23232 - mnt:21385910 630.557