Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4491g00004 ATGTCAAATGAGCATCCTAAGAAGGCCTACGGATGGGCTGCTAGGGATATTTCTGGTTTTCTCTCCCCTTTCAATTTCTCCAGAAGAGAAACGGGTGAAAAAGACGTGGCATTCAAAGTGTTGTACTGTGGGATATGCCACTCGGACCTCCACTCAGTAAAGAACGAATGGGGCTTTTCCACCTATCCACTAGTCCCTGGCCATGAAATAGTTAGTATAGTGACAGAGGTGGGAAGCAAAGTTGAAAAGTTCAAAGTTGGGGACAAGGTTGGTGTTGGAGGGTTGGTTGATTCCTGCAGATCATGCCAAAACTGCGCTAACAATCTTGAGAATTACTGCCCACAATATACAGCAGCATTTGGTGCCAAATATATTGATGGTACCATCACATATGGAGGCTTCTCTGACTCTATGGTTGCAGACGAGCACTTTGTGGTTCGCATTCCTGATGGCTTTCCTCTTGATGCTGCTTCTCCTCTCCTTTGTGCTGGGATCTCAGTGTATAGCCCTCTTAGATATTTTGGACTCGACAAGCCTGGTCTTCATGTGGGTGTGGTTGGTCTTGGTGGACTAGGCCATATGGCTGTTAAGTTTGCCAAAGCTTTTGGAGCTAATGTGACAGTAATTAATACATCACCCAACAAAAAGGAGGAAGCAATAGAACATCTGGGAGCTGACTCGTTTCTGATAAGCAGTGACCAAGATCAGATGCAGGCTGCAGTGGGCACTTTGGATGGAATTATTGACACAGTTTCTGCAGTTCATCCTCTCCTACCTCTGATTGGTTTACTCAAGTCCCATGGAAAGCTTGTGATGGTTGGTGCACCAGAAAAGCCTCTGGAGCTGCCAGTCTTTCCTTTACTTCTGGGTAAAAAGACAGTAGCTGGCAGTGGCATTGGAGGGATGAAGGAGACGCAAGAGATGATTGATTTTGCTGCTAAACACAATGTGAAACCGGACATTGAGGTCATTCCAATTGATTATGTCAACACAGCAATGGAACGCCTCCTCAAAGCAGATGTGAAATATCGATTTGTGATTGACATTGGAAACACACTGAAAACAAGCTCTTAA 1074 0.4507 MSNEHPKKAYGWAARDISGFLSPFNFSRRETGEKDVAFKVLYCGICHSDLHSVKNEWGFSTYPLVPGHEIVSIVTEVGSKVEKFKVGDKVGVGGLVDSCRSCQNCANNLENYCPQYTAAFGAKYIDGTITYGGFSDSMVADEHFVVRIPDGFPLDAASPLLCAGISVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFAKAFGANVTVINTSPNKKEEAIEHLGADSFLISSDQDQMQAAVGTLDGIIDTVSAVHPLLPLIGLLKSHGKLVMVGAPEKPLELPVFPLLLGKKTVAGSGIGGMKETQEMIDFAAKHNVKPDIEVIPIDYVNTAMERLLKADVKYRFVIDIGNTLKTSS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4491g00004 357 Gene3D - 163 319 - -
Gabi4491g00004 357 FunFam Cinnamyl alcohol dehydrogenase 163 319 - -
Gabi4491g00004 357 FunFam Putative cinnamyl alcohol dehydrogenase 6 320 349 - -
Gabi4491g00004 357 SUPERFAMILY GroES-like 1 195 IPR011032 -
Gabi4491g00004 357 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 153 318 IPR036291 -
Gabi4491g00004 357 Pfam Alcohol dehydrogenase GroES-like domain 34 147 IPR013154 -
Gabi4491g00004 357 SMART PKS_ER_names_mod 19 347 IPR020843 GO:0016491
Gabi4491g00004 357 FunFam Uncharacterized protein 12 162 - -
Gabi4491g00004 357 PANTHER ALDEHYDE REDUCTASE 3 352 IPR047109 GO:0016616
Gabi4491g00004 357 CDD CAD1 11 348 IPR047109 GO:0016616
Gabi4491g00004 357 Gene3D - 12 349 - -
Gabi4491g00004 357 Pfam Zinc-binding dehydrogenase 190 313 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4491g00004 Gabi-Chr4491 18318 26137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4491g00004 7 354 Monolignol Biosynthesis Gene Families AT4G37990 71.264 1.80e-171 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4491g00004 K23232 - gmx:100816901 604.364