Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi448g00012 ATGAAGAGGGTCAATTTCTGCAGAGGAGACAAGGTTGAGGTTTGCAGCAAAGAAGAAGGGTTTCGCGGTTCCTATTACGAAGCCACCATTGTTTCCCACCTTGACAATGGCCTCTACGTTGTTCGCTACAAGAACCTTCTCGAGGACAACGAGTCTCAGCCTCTCACCGAAACCCTTTATCCCAAGGAGCTTCGTCCATTGCCACCTCGTGTCCACGCTTCTCAGTTTGCGCTCTATCAGAAAGTCGATGCTTTCGACAACGATGGTTGGTGGGTTGGTTCGATCACTGGCAGATCTGGTTCTCACTACTACGTGTACTTTTCTACCACAAACGAAGAGATAGCGTACCCTTCTTCTCATATCAGGGTTCATCATGAATGGGTTAACGGGAATTGGGTTTTTTTGAATTAA 411 0.472 MKRVNFCRGDKVEVCSKEEGFRGSYYEATIVSHLDNGLYVVRYKNLLEDNESQPLTETLYPKELRPLPPRVHASQFALYQKVDAFDNDGWWVGSITGRSGSHYYVYFSTTNEEIAYPSSHIRVHHEWVNGNWVFLN 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi448g00012 136 CDD Tudor_Agenet_AtDUF_rpt1_3 6 69 - -
Gabi448g00012 136 SMART agenet_At_2 74 129 IPR014002 -
Gabi448g00012 136 SMART agenet_At_2 4 72 IPR014002 -
Gabi448g00012 136 Pfam Agenet domain 9 69 IPR008395 -
Gabi448g00012 136 CDD Tudor_Agenet_AtDUF_rpt2_4 80 123 - -
Gabi448g00012 136 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 6 134 - -
Gabi448g00012 136 Gene3D - 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi448g00012 Gabi-Chr448 111065 111475 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi448g00012 16 136 PHD Transcription Factor Family AT5G58610 27.815 2.18e-11 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi448g00012 - - gmx:106794115 210.69