Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4487g00004 ATGGAGAGCCAAAGCCAACTACAAGTTTCAAATTCAGGGCAACACAGCAGAGGAACCACCTTTTTAAAAACATGTTTCAATGGAATCAACTCCTTGTCAGGTGTTGGGATACTCTCAATTTCATATGCAGTTTCTAAAGGAGGGTGGCTGAGTTTAATACTGCTATTTATTTTTGCTATGATGTGCTGGTACACAGCGTTACTTCTGCAAAGGTGTATGAATGGAAATCCACAAATAAAATCCTACCCTGATATAGGTCAGGTAGCATTTGGGTACAAAGGAAGAGCTGTGGTAGCCATTATAATATATATGGAGCTGTTTTTAATTGCCGTGGAGCTTCTGATATTAGAAGGTGACAATTTGGAGAAGTTGTTTCCAAGCGTGAACTTCACAATTGCAGGCCTTAGAATTGGAGGTAAAAGAGGTTTTATCATGCTTTCTGCTTTGGTAATATTACCAACAACTTGGTTGAGAAGCTTGGGAGTTTTGGCCTACATTTCTGTTGGTGGGGTACTGGCTTCTATTATTTTACTTGGTTGTGTTGTGTGGGTGGGTGAAGTTGATAGTGTGGGGTTTCATGAAAGAGGACACTTTGTAAATTGGGGAGGATTGCCTACTGCTTTGAGCATTTTTGCTTTTTGTTACGGTGCACATGCTGTACTCCCCACACTAATCAATTCCATGAAAGATAGAAGTCAATCTTACAAGGTTTTGCTGGTTTGCTTCGTGGCAAGCACCATAATCTATGGATCCATTTCTATTTTAGGCTACATAATGTTCGGAGATTATTTGAAGTCTCAAATCACCTTAAACCTACCGACAAATAAAATAAGTACTAAAATAGCAATCTATACCACAATAATCAATCCTTTCACTAAGTATGCAGTTGTAATCACCCCAATAGCCAATGCTATTGAGGACAAATCGCTTCTCTGCAAGAGCAGGCCTATTGCCATCCTCATTAGAACAATCATCGTGGTCAGCACTGTGCTTATGGCATTATTCATTCCGTTTTTTGGGTACGTTATGGCATTTATTGGTGCATTCCTGAGTGTGGCAATCTCATTGTTGTTCCCATGCCTCTGTTACCTGAAGATAAACAAAGCTGCTAGGCGATTTGGGTTCGAGTTGATAATTATCATAGGAATTCTGCTAATGGGATCATTCATTGGAATATTGGGTACCTACATCTCCGTGAGGCAGATTGTAAATCAGCTCAAGCCATGA 1227 0.3993 MESQSQLQVSNSGQHSRGTTFLKTCFNGINSLSGVGILSISYAVSKGGWLSLILLFIFAMMCWYTALLLQRCMNGNPQIKSYPDIGQVAFGYKGRAVVAIIIYMELFLIAVELLILEGDNLEKLFPSVNFTIAGLRIGGKRGFIMLSALVILPTTWLRSLGVLAYISVGGVLASIILLGCVVWVGEVDSVGFHERGHFVNWGGLPTALSIFAFCYGAHAVLPTLINSMKDRSQSYKVLLVCFVASTIIYGSISILGYIMFGDYLKSQITLNLPTNKISTKIAIYTTIINPFTKYAVVITPIANAIEDKSLLCKSRPIAILIRTIIVVSTVLMALFIPFFGYVMAFIGAFLSVAISLLFPCLCYLKINKAARRFGFELIIIIGILLMGSFIGILGTYISVRQIVNQLKP 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4487g00004 408 Pfam Transmembrane amino acid transporter protein 18 395 IPR013057 -
Gabi4487g00004 408 PANTHER OS05G0424000 PROTEIN-RELATED 29 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4487g00004 Gabi-Chr4487 65823 67559 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4487g00004 2 406 Amino Acid or Auxin Permease AAAP Family AT3G28960 49.140 2.63e-146 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4487g00004 K15015 - gmx:100812006 622.468