Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4485g00003 ATGGTTGTGATGGATCTCAGAGAAATGAAGAAGACCTTCGGTTACCATGTTCTCACCGGCCGTTGGTTCATGGTCTTTGCCTCTTGTCTAATCATGGCAGTTTCTGGAGCAACCTATATGTTTGGTTTATACTCAAACGAAGTCAAAGCCTCTTTGGGTTATGACCAGTCAACTCTAAACTTGATAAGCTTCTTCAAGGACCTTGGTGCTAATCTCGGAATTTTCTCAGGTTTAATCAATGAGATTAGCCCTCCTTGGGTTGTACTAGCCATGGGGGCCATCATGAACTTCTTTGGTTACTTCATGATATGGCTCTCTGTCACTGGACGCATTGCAAAACCCCAAGTTTGGCAAATGTGTCTATACTTTTACATTGGTGCTAATTCACAGTCTTTTTCAAATACTGGTGCACTGGTCAATTGTGTCAAAAGCTTCCCAAGAAGCCGTGGCAGTGTTATTGGACTTCTCAAGGGTTACGTGGGTCTAAGTGGTGCCATTTTCACTCAATTCTACCATGCCTTCTATGGTGATGACTCAAAAGATCTTATCTTTCTCATTGGTTGGCTTCCTGCTGCTATTTCCTTCCTTTTTCTTCCTACTGTTCGGATATTGAACATAGTACCACAACCCAATAAGGAGCTTAAGGTTTTCTACAATCTTCTATATATTTCACTTGGTGTTGCTGGGTTTCTCATGGTGTTGATTGTCCTACAGAACAAGTTGAGTTTTACAAGGATTGAGTACGTTGTTGATGGCATAGTGGTTCTTTTCTTACTTCTCCTCCCACTTGCTGTGGTATTTAAAGAGGAACTCAAACTCTGGAAGACTCAAGACAAAACCTTAAATGAATCAGATGCTTCTCGATTGAAATTAGTCACCGAAGTTCCACCTTCAGTTATGGAATTGCCTCAGCCAGAATCACAGGCAGCACCAGCTTCCACAGCCACCACAGCTTCCAAAGTTTCGTGTTTGAGGAACATATTCAAACCCCCAAACAGGGGTGAGGACTATACAATATTCCAAGCTATGTTCAGCATTGACATGTTGATTCTGTTCATAGCAACAACATTTGGTGTTGGAGGAACATTAACAGCACTTGACAATTTGGGACAGATTGGGAACTCATTGGGATACCCAAGTAAGAGCCTCACCACCTTTGTGTCCTTAGTGAGCATATGGAACTATCTAGGACGAGCACTTTCTGGCTTTGTCTCTGAAATATTCTTAACCAAATACAAATTCCCACGTCCTTTGATGCTCACTCTAGTTATGCTTCTTTCTTGTGTTGGCCATCTTCTAATAGCCTTTGGTATCCCAAACTCTCTTTACTTTGCTTCTGTGATTATTGGGTTTTGCTTTGGTGCTATGTGGCCGTTAATGTTTGCAATCATATCTGAAATATTTGGCCTCAAATACTACTCCACATTATACAATTTTGGAGCCGTGGCAAGCCCTGTTGGGTCTTACATACTGAACGTGAGAGTGACTGGTTATTTGTATGATAAAGAGGCTTTGAAACAACTGGAGATGAAGCGACTCATAAGGCAAAAAGGGGAGGACTTAACTTGCATAGGAGTACAGTGCTATAGGATGGCTTTTTTCATAATCACTGCATCAACGTTGGTTGGATGTTTTGTTTCTTTCATTTTGGTGTTAAGGACCAGAAAGTTTTACAAAGGTGACATTTATGAGAAGTTCAAAGTGGAACTAGAGACACCACGGACAGAGAAGGTGAATGCCAAAAGTGGTGCTGTTCTGTATGAAACTGAAACTCTTGTAACCTTAGGCAGCACTGGGGCCTCTACCGCCACCACAACTGGCATGGAAGAACCGGATAAAATCAGTAGAAAATGA 1854 0.4175 MVVMDLREMKKTFGYHVLTGRWFMVFASCLIMAVSGATYMFGLYSNEVKASLGYDQSTLNLISFFKDLGANLGIFSGLINEISPPWVVLAMGAIMNFFGYFMIWLSVTGRIAKPQVWQMCLYFYIGANSQSFSNTGALVNCVKSFPRSRGSVIGLLKGYVGLSGAIFTQFYHAFYGDDSKDLIFLIGWLPAAISFLFLPTVRILNIVPQPNKELKVFYNLLYISLGVAGFLMVLIVLQNKLSFTRIEYVVDGIVVLFLLLLPLAVVFKEELKLWKTQDKTLNESDASRLKLVTEVPPSVMELPQPESQAAPASTATTASKVSCLRNIFKPPNRGEDYTIFQAMFSIDMLILFIATTFGVGGTLTALDNLGQIGNSLGYPSKSLTTFVSLVSIWNYLGRALSGFVSEIFLTKYKFPRPLMLTLVMLLSCVGHLLIAFGIPNSLYFASVIIGFCFGAMWPLMFAIISEIFGLKYYSTLYNFGAVASPVGSYILNVRVTGYLYDKEALKQLEMKRLIRQKGEDLTCIGVQCYRMAFFIITASTLVGCFVSFILVLRTRKFYKGDIYEKFKVELETPRTEKVNAKSGAVLYETETLVTLGSTGASTATTTGMEEPDKISRK 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4485g00003 617 CDD MFS_Mch1p_like 20 544 - -
Gabi4485g00003 617 Pfam Major Facilitator Superfamily 352 556 IPR011701 GO:0022857|GO:0055085
Gabi4485g00003 617 Gene3D MFS general substrate transporter like domains 347 558 IPR036259 -
Gabi4485g00003 617 SUPERFAMILY MFS general substrate transporter 21 560 IPR036259 -
Gabi4485g00003 617 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 563 - -
Gabi4485g00003 617 Pfam Nodulin-like 21 267 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4485g00003 Gabi-Chr4485 77254 79788 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4485g00003 11 567 Nodulin-like Gene Family AT2G39210 64.516 0.0 742