Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4483g00056 ATGGGTAAAACAATAAGTGGTTCTGGTGAATTTTGCAAGGGAAGCTTTGGAGTGCTATTGCCTATGATGAGGAAACTGCATACCACCTTCTCACGTCAAAAAGGAGTGAAACCTGGCCATTTTGTGGTGATTACAACCCAAGGATGGAAACCAGAGCGATTCTTTATTGAATTGGGATATTTGGATCACCCTGACTTTGTGAAGTTGCTAAAGCAGGCTGAAGAAGAGTTCGGGTTCTCTCAGATGGGAGCACTTTCAATTCCTTGCGAACCAGATGATTTGAAGAGAATCATTGGAAGGAAAAAGCATAGAAACAAGGGTGTTACTTGCTAG 333 0.4234 MGKTISGSGEFCKGSFGVLLPMMRKLHTTFSRQKGVKPGHFVVITTQGWKPERFFIELGYLDHPDFVKLLKQAEEEFGFSQMGALSIPCEPDDLKRIIGRKKHRNKGVTC 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4483g00056 110 Pfam Auxin responsive protein 32 98 IPR003676 GO:0009733
Gabi4483g00056 110 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 31 96 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4483g00056 Gabi-Chr4483 465776 466108 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4483g00056 36 99 Calmodulin-binding Proteins AT4G34750 40.625 5.92e-12 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4483g00056 - K14488 gmx:100795119 167.162