Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4483g00055 ATGGAGGTTCATAGGAAGATGCTCAAGTCGTTGATAACAAAGGTGCTAAAGGGTCTTCCATTCTTGGCACACAGTGGATCAGCATATCCGAGAAGAGCTTACATGAGAGACATTGATGATGAGAATGAAACAGAAATAGGAGTTCCAGAAGATGTTAGAGAAGGGCATTTTGCGGTTATAGCAATCAAGGGTGAAGAAGCCAAGAGGTTCATTGTTGAGTTAGATTATTTAAATGATCCAGGTTTCTTGAGACTGTTGGAGCAGGCTAGGGAAGAGTATGGATTTGGACAGAAGGGTGCTCTTGCAGTTCCTTGCAGGCCACAAGAACTTGAGAAGATTATTGAGAATCGACAAGTGGAAAGTGCCATCATTAATCCAATTTAA 384 0.4167 MEVHRKMLKSLITKVLKGLPFLAHSGSAYPRRAYMRDIDDENETEIGVPEDVREGHFAVIAIKGEEAKRFIVELDYLNDPGFLRLLEQAREEYGFGQKGALAVPCRPQELEKIIENRQVESAIINPI 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4483g00055 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 34 113 IPR003676 GO:0009733
Gabi4483g00055 127 Pfam Auxin responsive protein 46 115 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4483g00055 Gabi-Chr4483 454918 455301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4483g00055 50 114 Calmodulin-binding Proteins AT4G34750 47.692 1.44e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4483g00055 - K14488 gmx:102661602 163.31