Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4483g00040 ATGAAGGGGGAGTTTTTGAGAAGGTGCCTTAACAAGTGGAAGAAAATGGGGAGTGGTGTCATACCTTGTGCTGCATGCGATTACTGCTGCCAATGGGCTATGTGGTCTTCCATGCATAAAAGGGACTCCATCCCCAATGATGTCCCAAAGGGTCACTTGGTTGTCTATGTAGGAGAGAACCACAAGAGATTTGTCATCAAGATTACATTACTCAATCATCCACTCTTCAAGGCCTTGCTGGATCAAGCTCAGGACGAATATGATTTCATTGCAGATTCAAAACTCTGTATTCCTTGCAATGAGCGTCTTTTCCTCAGTGTCCTTCGCTTTGCAAGCTCTCCACAGAATGAACGGGTGTTTGTGTAA 366 0.4481 MKGEFLRRCLNKWKKMGSGVIPCAACDYCCQWAMWSSMHKRDSIPNDVPKGHLVVYVGENHKRFVIKITLLNHPLFKALLDQAQDEYDFIADSKLCIPCNERLFLSVLRFASSPQNERVFV 121
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4483g00040 121 Pfam Auxin responsive protein 37 109 IPR003676 GO:0009733
Gabi4483g00040 121 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 35 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4483g00040 Gabi-Chr4483 326660 327025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4483g00040 31 112 Calmodulin-binding Proteins AT4G34750 39.759 6.35e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4483g00040 K14488 - vvi:100253355 202.601