Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4483g00017 ATGGCAACTGAAGCAGAAGGCTTTCCCAAGGATAATGACCAAGGCGCTGGTACCACTAGTGTTACCATCAACACTGCCAGTAGAACTGATAATCCAATTCAAAAGAAAGAAGGACACCAATTACAAATTCATGTGCTTGCCAAAGATGGGAACTCATCTATAGGCGGCATGTTTCGTATAGTTCCTACCACTCCACCGTTGGCTGAGAGTATTATTGACACAACATCTACAAAATATCCACCTGAATATACTGTTGAAAATGAGGATAGCGAAGATATTCCTGAAGAAGAAGCTGTCTGCAGAATTTGTTTGATTGAATTGAGAGAAGTTGCTAATACCCTTAAAATAGAGTGCAGCTGCAAAGGTGAACTTGCTCTGGCACACCAAGAGTGTGCAGTTAAATGGTTTAGCATTAAAGGCAATAGAACATGTGATGTGTGCAAGCAGGAAGTTCAGAACCTACCTGTTACTCTTTTACGGGTTCCTAGTGACCGGGAACTTAACTTGATAGGGAGCAGAGATCAACTAAACAGGTATTGGCAAATAGTTTCCATTCTTGTCATAATCAACACGCTGGCTTACTTCTGTTTTCTTGAGCAGCTCCTTGTCACAAATATGGGATCTGGTGCCATTGCCATATCTCTCCCATTTTCTTGTGTACTGGGTCTTCTTGCAAGCGCCACGTCCTCAACAATGGTCAGGAGAAAACATGTTTGGGTTTATGCAATTGGCCAGTTTATTATGATGGTTCTCGCTGGATGTCTTTTCTACTCACTGCTTCATATGCAAGCTGTTCCATCTATTCTACTTGCTACATTTACTGGGTTTGGAGCTGTTGAGTTTTTAAAATGGGGGAGACGATGGCTTTGTCAACTGAATCAACAACATGAATCCCAAGAAATGTTATCACCTGATCAATCATCTGCAACCCCTCATCAGGCTCAGATTGATTCTCAACATCATGAAACTAATAGGCAAGCTCTGCAGCTTGTGAGCTAA 999 0.4184 MATEAEGFPKDNDQGAGTTSVTINTASRTDNPIQKKEGHQLQIHVLAKDGNSSIGGMFRIVPTTPPLAESIIDTTSTKYPPEYTVENEDSEDIPEEEAVCRICLIELREVANTLKIECSCKGELALAHQECAVKWFSIKGNRTCDVCKQEVQNLPVTLLRVPSDRELNLIGSRDQLNRYWQIVSILVIINTLAYFCFLEQLLVTNMGSGAIAISLPFSCVLGLLASATSSTMVRRKHVWVYAIGQFIMMVLAGCLFYSLLHMQAVPSILLATFTGFGAVEFLKWGRRWLCQLNQQHESQEMLSPDQSSATPHQAQIDSQHHETNRQALQLVS 332
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4483g00017 332 PANTHER OS02G0165000 PROTEIN 49 302 - -
Gabi4483g00017 332 CDD RING_CH-C4HC3_MARCH 100 148 - -
Gabi4483g00017 332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 84 156 IPR013083 -
Gabi4483g00017 332 MobiDBLite consensus disorder prediction 1 20 - -
Gabi4483g00017 332 ProSiteProfiles Zinc finger RING-CH-type profile. 92 154 IPR011016 GO:0008270
Gabi4483g00017 332 SMART ringv_2 99 148 IPR011016 GO:0008270
Gabi4483g00017 332 Pfam RING-variant domain 100 147 IPR011016 GO:0008270
Gabi4483g00017 332 SUPERFAMILY RING/U-box 96 151 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4483g00017 Gabi-Chr4483 88454 91295 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4483g00017 85 167 C3H Transcription Factor Family AT2G37950 35.632 2.32e-12 63.5