Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4478g00004 ATGTATGCAAATGAAACTATGAAAGTAACTTGCGAAACAGGTCAGGACTTGACGGGTTTGGCTGGGAGCCCTGCATATGTTGCACCAGAAGTGTTGTTGGGTAGATACTCAGAAAAGGCGGATATATGGAGTGCTGGAGTGCTCCTGCATGCTCTGTTGGTTGGTGTTCTTCCATTTAAAGGGGATTCACAAGAAGCAGTTTTTGAGGCTATTAAGAATTCCAAGCTAGATTTCCAAACCGGGATGTGGGAATCAATATCTAAACCTGCACGAGATCTTGTTGGGAGAATGCTGACAAGGGATATTTCAGCAAGGATAACAGCTGATGAAGTACTTAGACATCCATGGATATCTTTCTACACAGAACGTACATTGAAGATCCTGCCCGTTGAATCAAAGTTGAAGCACCAAAATGGAGCTGCTTCCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAAAAACAGGATGGATGATGGGTTCCTTAATGAGGTTTCAAAGTTGAAGCACCAAAATGGAGCTGCTTGCCACAACTTTGTTGCTGCACCTGAACCTAGGTTAGGAAGAAACAAGATGGATGATGGGTTCCTTAATGAGGTTTCAAGCCTTTCAATGCTTTTTCTTATATAA 633 0.4281 MYANETMKVTCETGQDLTGLAGSPAYVAPEVLLGRYSEKADIWSAGVLLHALLVGVLPFKGDSQEAVFEAIKNSKLDFQTGMWESISKPARDLVGRMLTRDISARITADEVLRHPWISFYTERTLKILPVESKLKHQNGAASHNFVAAPEPRLGKNRMDDGFLNEVSKLKHQNGAACHNFVAAPEPRLGRNKMDDGFLNEVSSLSMLFLI 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4478g00004 210 Gene3D Transferase(Phosphotransferase) domain 1 6 151 - -
Gabi4478g00004 210 SUPERFAMILY Protein kinase-like (PK-like) 15 149 IPR011009 -
Gabi4478g00004 210 Pfam Protein kinase domain 13 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4478g00004 210 PANTHER SERINE/THREONINE-PROTEIN KINASE 15 159 - -
Gabi4478g00004 210 SMART serkin_6 4 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4478g00004 210 ProSiteProfiles Protein kinase domain profile. 1 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4478g00004 Gabi-Chr4478 76529 77939 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4478g00004 7 117 EF-hand Containing Proteins AT4G35310 49.550 3.93e-32 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Gabi4478g00004 Pkinase 4.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4478g00004 - - gmx:100812729 232.261