Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4472g00064 ATGGCGGGTATATTCTCATTAGGCAGCAGCGGAGGAAGAAGAGGGAACAACAACAACAACAACAACAACAACACCAACACCAACGACCAACACCAGCACAACTCACCCACGGATATTCCTCCTCCCGACAACTTATTCTGGTATAACAAAAATGACGATGTTTCCACCTACCGAGGTTTCGAGCTATGGAACCAACAACAACATCAACAAGAACAAGAACAACAACTCATCCCTCAAGTGCGGCCTCTCTTCCACCCAGATCTTTACTCGTCAGCAGCTGCTTTAGGTGTGGGGCCCAGCAGGCTCGTTTCCGATGATCAATCGTCGTCGAGATCCGCCTTCATGGTGAGCAGCTCCGCCGTAGGAAGCGGAAGCGGAGGGATAAGCTGTTTAGACTGCGGAAACCAAGCGAAGAAAGATTGCCCTCACATGCGATGCAGGACTTGCTGCAAGAGTCGAGGCTTTGATTGCCAAACCCATGTGAGAAGCACTTGGGTTCCAGCTTCCAAGCGCCGCGAGAGACAACAGCAACTAGCTACTTTGCAACAAGGGGGAGGAGGAGGAGGAGGAGAAGAAGATCTTCCTAGAAGGCACAGAGATCATAACTCAACCTCTTCGCCTCTCGCCTGCACTCGTTTACCTACAAACCCCTCACCCTCAGGGTTAGATGATGTAAATTTTCCTGCGGTGGTGAGTTCTTCTGCGGAGTTCAGGTGCGTACGTGTTAGTTCGATGGAAGATGCGGACGAAGAGTATGCATACTCAACGGCTGTAAACATTGGAGGGCATGTGTTCAAAGGAATTCTCTACGACTACGGTCCAGATAGCAGTAATTACATGGAAAGCTCCTCCACCGGAGTTCAGCCGTCGAACACCGCTGCATCCGCCGCTGCCGTTGTGTCTGGGGCAATCGTCGATCCTTCTTCCTTGTATCCAGCTCCTCTTAACGCCTTTATGCCTGGTAGTGGTACGCAATTCTTCCCTCACCCAAGATCTTGA 999 0.5095 MAGIFSLGSSGGRRGNNNNNNNNNTNTNDQHQHNSPTDIPPPDNLFWYNKNDDVSTYRGFELWNQQQHQQEQEQQLIPQVRPLFHPDLYSSAAALGVGPSRLVSDDQSSSRSAFMVSSSAVGSGSGGISCLDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVRSTWVPASKRRERQQQLATLQQGGGGGGGEEDLPRRHRDHNSTSSPLACTRLPTNPSPSGLDDVNFPAVVSSSAEFRCVRVSSMEDADEEYAYSTAVNIGGHVFKGILYDYGPDSSNYMESSSTGVQPSNTAASAAAVVSGAIVDPSSLYPAPLNAFMPGSGTQFFPHPRS 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4472g00064 332 Pfam Domain of unknown function (DUF702) 127 275 - -
Gabi4472g00064 332 MobiDBLite consensus disorder prediction 10 39 - -
Gabi4472g00064 332 MobiDBLite consensus disorder prediction 167 217 - -
Gabi4472g00064 332 NCBIfam LRP1 C-terminal domain 227 274 IPR006511 -
Gabi4472g00064 332 NCBIfam putative zinc finger domain, LRP1 type 129 171 IPR006510 -
Gabi4472g00064 332 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 316 IPR007818 GO:0003700|GO:0006355
Gabi4472g00064 332 MobiDBLite consensus disorder prediction 167 183 - -
Gabi4472g00064 332 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4472g00064 Gabi-Chr4472 680757 682380 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4472g00064 1 332 C2H2 Transcription Factor Family AT3G51060 45.455 1.89e-84 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Gabi4472g00064 DUF702 3.4e-62 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4472g00064 - - gmx:100797973 397.897