Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4472g00062 ATGGTGCCTACACGAGCTAAGCTTCACATAGCCTTAACTTTTTTACAATTTTGTCATGCTGGAAATCATATATTTCTTAAAATTGCACTCAATACGGGTGTAAGCAAGTTTGTCTTTCCTATCTATAGAAACATTACCGCTTTGGTCCTTCTGGGTCCCCTTGCATATTTTTCAGAGAGGAAAGACAGGCCGCGAATAACCAGTTATTGTCTGGTACAATTTTTCCTCCTTGGACTTGTTGGAATAACAATGAAAGAAGGATTCTATTTCTTGGGTTTGGAGAACACATCACCAACGTTTGCTGCTGCTATGCAGAACTCTGTTCCAGCCCTGACCTTTCTGATGGCTGCGGTACTCAGATATGAGAGTGTGCACTTCAATAGGATACATGGTCTGGCCAAGGTCCTTGGAGTCCTTGCTTCTGTTGGAGGAGCTTCAATCATTACCCTTTACAAGGGACCTACCATTTATACTCCACATTTAGCATTACATCAGGAACATTTCATGTCTGTGTTCGGGGATGCCACGGGAAAGAACTTGAGCTTGGGTGGCATTTATCTCTTTGGTCACTGCTTATGTTGGTCTGGTTGGATTGTGATGCAAGCATTTGTTCTGAAAAATTACTCAGCCAAACTCACAGTTTCTGCTTTTACTTGCTTCTTTGGTATTGTGCAGTTTATGACAATTGCAGCATTTTTTGAGAAGGATTCTAAAGCCTGGCAGCTCAATTCAAGTAGTGAGATCTACAGTATTTTGTTCTCGGGTCTGGTGTCTTCAGGGCTGGCAGCAGCATTACAGATATGGACTATCAGCAAGGGAGGGCCAGTGCTTGCTTCAATATATCTACCGTTACAGACATTACTCGTAGCTTTGGTGGCATCCATTATTTTCGGTGAAGAATTCTTCTTGGGAGGGATTATCGGAGCTTTCTTAATTGTATCAGGCTTATACCTTGTTGTCTGGGGAAGAAGTGAAGAAACCAAGTCTGTCAAAGAGGTCGTAGTCCCCATTGAGCCCGAGAATCAAATGGAAGGAAAATGTGACAGTTCTTCCCTCATCCAACCATTGATTCCTACACAAAACTCTCTAAGAAATTAG 1098 0.4235 MVPTRAKLHIALTFLQFCHAGNHIFLKIALNTGVSKFVFPIYRNITALVLLGPLAYFSERKDRPRITSYCLVQFFLLGLVGITMKEGFYFLGLENTSPTFAAAMQNSVPALTFLMAAVLRYESVHFNRIHGLAKVLGVLASVGGASIITLYKGPTIYTPHLALHQEHFMSVFGDATGKNLSLGGIYLFGHCLCWSGWIVMQAFVLKNYSAKLTVSAFTCFFGIVQFMTIAAFFEKDSKAWQLNSSSEIYSILFSGLVSSGLAAALQIWTISKGGPVLASIYLPLQTLLVALVASIIFGEEFFLGGIIGAFLIVSGLYLVVWGRSEETKSVKEVVVPIEPENQMEGKCDSSSLIQPLIPTQNSLRN 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4472g00062 365 Pfam EamA-like transporter family 16 135 IPR000620 GO:0016020
Gabi4472g00062 365 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Gabi4472g00062 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 137 - -
Gabi4472g00062 365 PANTHER WAT1-RELATED PROTEIN 10 327 IPR030184 GO:0016020|GO:0022857
Gabi4472g00062 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4472g00062 Gabi-Chr4472 663284 665753 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4472g00062 2 359 Nodulin-like Gene Family AT1G75500 55.191 9.39e-143 408
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4472g00062 - - gmx:100790386 586.645