Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4472g00045 ATGGATTGGCTTCTTGAACTCGAACCATTCAAGATGGCTATCTTGTTCATTATCCCACTCATATTGCTTTTGGGTATAGTGTATAGAAATCGTGGAAGGCCACCATATCCACCAGGGCCAAAAGGGTTACCCATTATAGGTAACATGTTGATGATGGACCAATTAACACACCGTGGTCTAGCCAACCTAGCAAAGCAATACGGTGGCATCTTCCACCTTCGAATGGGGTTCCTTCACATGGTGGCTATTTCAGACCCAGATGCAGCACGTCAAGTTCTCCAAGTCCAAGACAACATCTTCTCCAATCGTCCAGCCACCGTAGCCATAAGCTACTTAACCTATGACCGTGCAGACATGGCTTTCGCTCACTATGGTCCCTTCTGGCGTCAGATGCGAAAGCTTTGCGTCATGAAGCTCTTCAGCCGCAAGCGAGGAGAGTCATGGCAATCCGTTAGAGACGAAGTGGACGCCGCCGTACGCTCCGTCGTGGCCAACACCGGAAAAGCCGTTAACATCGGGGAGCTAGTGTTCAACCTGACCAAGAACATAATATATCGTGCGGCTTTTGGTTCGAGTTCGCAGGAAGGTCAAGATGAGTTCATTGGTATATTGCAAGAGTTCTCCAAATTGTTTGGAGCTTTCAACATCGCTGATTTTATACCCTACCTGGGTGGTGTTGATCCTCAAGGGCTTAATACTAGGCTTGTTAAGGCTCGTGGGGAACTTGATAGCTTCATAGACAAGATCATCGATGAACATGTCCAGAAGAAGAGGAATCATGATGGTGATGATGATGATGAAGAAACGGACATGGTGGATGAGTTGCTTGCTTTCTACAGCGATGATGCTAAAGTGAATAGTGAATCAGATGATCTGCAGAACTCAATCAAACTCACTAAGGATAATATCAAAGCCATCATTATGGACGTCATGTTTGGAGGAACGGAAACGGTGGCATCGGCGATTGAGTGGGCCATGGCGGAGCTAATGAGAAGCCCAGAAGATCTGAAGAGGGTCCAACAAGAGCTCGCGGATATCGTGGGCCTGGATCGTCGGGTCGAGGAGCCCGACTTCGAGAAACTCACCTACCTCAAATGCGCCCTCAAAGAGACCCTCCGCCTCCACCCACCCATCCCCCTACTCCTCCACGAGACGGCGGAGGAGGCGACGGTCGCCGGCTACTTCGTCCCGAAGAAGGCGCGCGTGATGATCAACGCGTGGGCCATTGGGAGAGACAAGAACTGCTGGGACGAACCCGAAAGCTTCAAGCCCTCCCGGTTCCTGAAACCGGGCGTGCCAGACTTCAAAGGGAGCAACTTCGAGTTCATACCATTCGGGTCGGGTCGTAGGTCATGCCCCGGGATGCAGCTGGGTCTCTACGCGCTGGAGTTGGCGGTGGCTCACTTACTTCACTGCTTCACGTGGGAGTTACCTGATGGGATGAAACCCAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCCAGGGCGAGTCGACTCGTTGCCATACCCACCAAGCGCGTGGTGTGCCCTCTCTTTTAG 1548 0.5161 MDWLLELEPFKMAILFIIPLILLLGIVYRNRGRPPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGIFHLRMGFLHMVAISDPDAARQVLQVQDNIFSNRPATVAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRGESWQSVRDEVDAAVRSVVANTGKAVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGGVDPQGLNTRLVKARGELDSFIDKIIDEHVQKKRNHDGDDDDEETDMVDELLAFYSDDAKVNSESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDLKRVQQELADIVGLDRRVEEPDFEKLTYLKCALKETLRLHPPIPLLLHETAEEATVAGYFVPKKARVMINAWAIGRDKNCWDEPESFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRASRLVAIPTKRVVCPLF 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4472g00045 515 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS P450 superfamily signature 313 330 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 CDD CYP71-like 66 502 - -
Gabi4472g00045 515 PANTHER CYTOCHROME P450 84A1-RELATED 11 514 - -
Gabi4472g00045 515 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Gabi4472g00045 515 Pfam Cytochrome P450 37 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 88 109 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 322 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 302 319 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 405 429 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 64 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 179 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 FunFam Cytochrome P450 84A1 29 508 - -
Gabi4472g00045 515 Gene3D Cytochrome P450 29 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4472g00045 515 SUPERFAMILY Cytochrome P450 29 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4472g00045 Gabi-Chr4472 467450 470509 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4472g00045 44 514 Monolignol Biosynthesis Gene Families AT4G36220 77.378 0.0 783
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4472g00045 K09755 - gmx:100783430 881.322