Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4472g00020 ATGGCCATAAAAAGATCCAATAAACTACCACAAGCTGTTGTTCTCAAGCAAATTCTCAAAAGATGCTCAAGTTTTGGAAAGAAGCAGAGCTACAATGAAGAGGGTCTTCCTTATGATGTACCAAAAGGCCATTTTGCAGTGTATGTTGGAGAGAACAGGACCAGATACATTATCCCAATTTCATGGCTGGCTCACCCTCAGTTTCAAAGTCTGCTCCAAAGAGCTGAGGAGGAGTTTGGCTTCAATCATGATATGGGACTTACCATCCCCTGTGATGAAGTTGTTTTTGAGTCCCTAACCTCAATGATGAGATAA 315 0.4159 MAIKRSNKLPQAVVLKQILKRCSSFGKKQSYNEEGLPYDVPKGHFAVYVGENRTRYIIPISWLAHPQFQSLLQRAEEEFGFNHDMGLTIPCDEVVFESLTSMMR 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4472g00020 104 Pfam Auxin responsive protein 17 103 IPR003676 GO:0009733
Gabi4472g00020 104 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 30 102 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4472g00020 Gabi-Chr4472 194535 194849 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4472g00020 5 103 Calmodulin-binding Proteins AT4G34750 42.424 6.86e-22 82.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4472g00020 K14488 - gmx:100798840 203.756