Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00098 ATGCTGCCTGATCAGAGAAAAAAGTCCTCTGTAGATATAGACTTCTTTACAGAATATGGCGAAGGGAGTAGATACAAAATAGAGGAAGTGATTGGTAAAGGAAGCTATGGTGTTGTTTGCTCTGCATATGATACACACACTGGAGAAAAGGTTGCAATAAAGAAAATCAATGACATATTTGAACATGTTTCTGATGCCACCCGGATTCTTCGTGAGATCAAGCTTCTTAGACTCTTACGTCATCCCGATATCGTGGAGATCAAGCATATTTTGTTACCTCCTTCTAGAAGGGAATTCAAAGATATATATGTTGTTTTTGAACTCATGGAATCTGATTTACATCAGGTCATCAAAGCAAATGATGATTTGACTCCAGAGCATTACCAGTTTTTTCTCTATCAGCTTCTTCGAGGCTTGAAGTATATACACACAGCAAATGTTTTTCACCGAGATCTAAAGCCAAAAAACATTTTAGCAAATGCTGACTGCAAACTGAAGATTTGCGACTTTGGTCTTGCCAGAGTGGCTTTCAATGATACGCCCACTGCTATATTCTGGACAGATTATGTTGCAACAAGGTGGTACAGGGCACCAGAGTTGTGTGGATCCTTTTTCTCCAAGTATACACCAGCCATAGACATATGGAGCATTGGCTGCATTTTTGCAGAACTTTTAACTGGAAAGCCTCTTTTCCCGGGGAAGAATGTTGTCCATCAATTGGACCTCATGACTGATTTTCTAGGAACACCATCTCATGAAGCCATTGCTAGGGTACGAAATGAGAAAGCTCGGAGATACTTGAGCAGCATGCGCAAGAAGAAGCCAGTTCCTTTCTCCCACAAGTTTCCTAATGCAGACCCCCTTGCTCTTCGTGTGCTAGAAAGAATGCTGGCATTTGAACCTAAGGATCGACCTACTGCTGAAGAGGCTCTAGCTGATCCATATTTTAAAGGCTTGGCCAAGGTTGAGAGGGAGCCTTCTGCTCAGCCAGTTACCAAGATAGAATTTGAATTTGAGAGACGAAGGATAACAAAGGAAGATGTGCGAGAGCTTATATACCGAGAGATTCTGGAGTACCATCCAAAGATGTTAAAGGAACATCTAGAGGGAGAAGAGCCAACAGGATTCATGTATCCAAGTGCTGTGGACCACTTCAAGAAGCAATTTGCATATCTTGAGGAGCATTATGGAAAAGGTGGAACTGTTACTCCACCTGAGAGGCAACATGCATCATTACCCAGGCAGTGTGTGTTGTATCCAGATAACTCAAGACAGAATATGACTGAGGTTACAGACAATCTCTCCAAGTGTTGCATCAAAGAAGTTGAGAAGCCAGCTGTAGATAGGACTCGTGGTACCCCTGTGACAAGGCTTCCTTTACAAGCTCCTCAAAATATTCATGGCATTGCTGCACGGCCTGGAAAAGTTGTTGGTTCAGCATTGCATTACAACAACTGTGGGGTAGCAGTGACAGCAAAGGCTGAGCAGCGGAAGATGGTTAAAAATCCATCTGTTTCAGCTCAGTATGCTACTTCAAGCTGTTCATATCCCAGAAGAAACCCAAGCTGTAAAAATGAGAGGGCAGAAGATGGGATTGAAGGTTCTAATGGGCTTCAGCCAAAGCCTCAATACATAGCACGAAAAGTTGCTGCTGCTCAAGGTGGAGCCGGTGGTAATTGGTATTGA 1686 0.4294 MLPDQRKKSSVDIDFFTEYGEGSRYKIEEVIGKGSYGVVCSAYDTHTGEKVAIKKINDIFEHVSDATRILREIKLLRLLRHPDIVEIKHILLPPSRREFKDIYVVFELMESDLHQVIKANDDLTPEHYQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAELLTGKPLFPGKNVVHQLDLMTDFLGTPSHEAIARVRNEKARRYLSSMRKKKPVPFSHKFPNADPLALRVLERMLAFEPKDRPTAEEALADPYFKGLAKVEREPSAQPVTKIEFEFERRRITKEDVRELIYREILEYHPKMLKEHLEGEEPTGFMYPSAVDHFKKQFAYLEEHYGKGGTVTPPERQHASLPRQCVLYPDNSRQNMTEVTDNLSKCCIKEVEKPAVDRTRGTPVTRLPLQAPQNIHGIAARPGKVVGSALHYNNCGVAVTAKAEQRKMVKNPSVSAQYATSSCSYPRRNPSCKNERAEDGIEGSNGLQPKPQYIARKVAAAQGGAGGNWY 561
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00098 561 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Gabi4470g00098 561 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4470g00098 561 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Gabi4470g00098 561 SUPERFAMILY Protein kinase-like (PK-like) 22 320 IPR011009 -
Gabi4470g00098 561 Gene3D Phosphorylase Kinase; domain 1 40 361 - -
Gabi4470g00098 561 MobiDBLite consensus disorder prediction 512 540 - -
Gabi4470g00098 561 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Gabi4470g00098 561 FunFam Mitogen-activated protein kinase 15 119 - -
Gabi4470g00098 561 FunFam Mitogen-activated protein kinase 111 339 - -
Gabi4470g00098 561 CDD STKc_TDY_MAPK 24 361 - -
Gabi4470g00098 561 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4470g00098 561 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 360 - -
Gabi4470g00098 561 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Gabi4470g00098 Gabi-Chr4470 776552 782425 Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00098 1 561 MAP Kinase Gene Family AT5G19010 79.443 0.0 934
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi4470g00098 Pkinase 2e-67 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00098 - - qsa:O6P43_021642 1036.94