Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00083 ATGAATATTATTTCGGGATTGTCAGCAGCTGCTTCTGCCTGCAAGCCCCTAGTAAGTTTCCAACCGGCACTCACCATGGAGCTGTCCTTGTTCCACCAACGTAAGGATAAGGTTGTTGTCATCATGGGCGCAACGGGTAGCGGGAAATCGAAGCTGGCCATAGACCTAGCCACCCATTTCCCACCAGCTGAGATTGTCAACTGTGACAAAATGCAAGTTTATAAAGGCCTTGACATCACCACAAACAAGGTCACAGATGAAGAGTGTCGTGGGGTCCCACACCATCTGTTAGGCATGGTTGATCCTAACTCTGATTTCACTGCCAATGACTTTTGTCACCAAGCCTCTCTGTCCATAGGTTCCATCGTGGGGAGGGATGCACTTCCCATCATTGCTGGTGGGTCCAACTCTTTCATCGATGCATTGGTCAACCATCAACCTGAGTTTCGGTTAAGGTACGAGTGTTGTTTTCTCTGGGTCGATGTCTCACTCCCTGTCCTCCATTCCTCTCTCTCAGCACGTGTGGATCGCATGATTGAGGCTGGTCAGATTGATGAGGTTCGTCAATTTTTTGACCCATCCCATGATTACACAAAAGGGATAAGAAGAGCCGTTGGTGTCCCTGAATTTGATGAGTTTCTCAGAACTGAAGATGAAGCTGATGAAGGAACAAAGAAGAGGCTCCTTGACGCTGCCATTGCCAGGATCAAAATCAATAACTGCAGCCTCGCCAATCGCCAGCTTCAGAAGATTCATCGCCTTTACAATATCTGGAAACGGAATATGCACCGCCTCGACGCCACCGAGTCCTTCCTCAAGGGTACACGTGAGGAAGCAGAGGAGGCTTGGGAGGATCACGTATTCTCAAAGAGTCGCAGGATCCTCCACAAGTTCCTCTACGAGGAAACCCATGTCCCCGTCGGTATTGTGTCCCCCAAAGCCGCTGCAATTGTTTCTGCGCCGCCGCCGTCACCGCCGTCGGCCATGGCCGCGATAACCCATTAG 1005 0.5045 MNIISGLSAAASACKPLVSFQPALTMELSLFHQRKDKVVVIMGATGSGKSKLAIDLATHFPPAEIVNCDKMQVYKGLDITTNKVTDEECRGVPHHLLGMVDPNSDFTANDFCHQASLSIGSIVGRDALPIIAGGSNSFIDALVNHQPEFRLRYECCFLWVDVSLPVLHSSLSARVDRMIEAGQIDEVRQFFDPSHDYTKGIRRAVGVPEFDEFLRTEDEADEGTKKRLLDAAIARIKINNCSLANRQLQKIHRLYNIWKRNMHRLDATESFLKGTREEAEEAWEDHVFSKSRRILHKFLYEETHVPVGIVSPKAAAIVSAPPPSPPSAMAAITH 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00083 334 Pfam IPP transferase 72 145 - -
Gabi4470g00083 334 Pfam IPP transferase 149 249 - -
Gabi4470g00083 334 Gene3D - 35 299 IPR027417 -
Gabi4470g00083 334 FunFam Adenylate isopentenyltransferase 5, chloroplastic 164 262 - -
Gabi4470g00083 334 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 164 262 - -
Gabi4470g00083 334 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 193 IPR027417 -
Gabi4470g00083 334 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 35 298 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4470g00083 Gabi-Chr4470 678525 679529 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00083 152 303 C2H2 Transcription Factor Family AT2G27760 31.285 1.88e-19 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00083 K10760 - gmx:100782474 457.218