Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00073 ATGGGAACCTCAGCTGCTATGGATCAATTTGATGAATCCATGAAGAAACAAATAGCATCACTTTTGCGGGTTATGAATTTAGTTAAATCTTTCAAACAGGATAATACTCCTTGCAAAATTGACGAGGGTCTCTTTTTGGGTTCGGTTGGCACTGCAGCTAACAAGGATGCATTGAAAAACTTGAATGTTACTCACATTTTGACAGTGGCTGGTAAATTGGAACCTGCACATCCTGGGGATTTTGTCTATAAAATTATAGATGTTGCTGACAGAGAGGATGTCAACTTAAAACAACACTTCAGTGAGTGTTTTGATTTTATTAATGAAGCCAAAAGACGTGGTGGAGGGGTCTTGGTTCATTGTTTTGCTGGAAGATCAAGGAGTGTGACTATTGTTGTGGCATATCTGATGAAGAATCGTGGAATGAGCTTATCTGAAGCTCTGCAACGTGTAAAGATTAAACGACCAATAGCAGCTCCTAATCCTGGTTTTGTTCATCAGCTGGAGGACTTCGAAAAATCCCTTCAAGATTGGATCTGTTTTGTTTTTGGAAAGACATCGAAGTGTCTGAATATAGAACATGATGGAGATTAG 594 0.3906 MGTSAAMDQFDESMKKQIASLLRVMNLVKSFKQDNTPCKIDEGLFLGSVGTAANKDALKNLNVTHILTVAGKLEPAHPGDFVYKIIDVADREDVNLKQHFSECFDFINEAKRRGGGVLVHCFAGRSRSVTIVVAYLMKNRGMSLSEALQRVKIKRPIAAPNPGFVHQLEDFEKSLQDWICFVFGKTSKCLNIEHDGD 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00073 197 Gene3D Protein tyrosine phosphatase superfamily 27 178 IPR029021 -
Gabi4470g00073 197 FunFam Dual specificity phosphatase 12 38 183 - -
Gabi4470g00073 197 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Gabi4470g00073 197 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 35 176 IPR029021 -
Gabi4470g00073 197 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 34 175 - -
Gabi4470g00073 197 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
Gabi4470g00073 197 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 98 156 IPR000387 GO:0016311|GO:0016791
Gabi4470g00073 197 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
Gabi4470g00073 197 CDD DSP 37 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4470g00073 Gabi-Chr4470 568549 572660 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00073 39 176 Protein tyrosine phosphatase (PTP) family AT3G06110 58.696 2.37e-57 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00073 - - lang:109352945 294.664