Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00062 ATGCAAGTCACTAAGGTTGCTAGGATGTTGGCAGCAAAGCCAACTGGAGTTGAGGGGGAGCAGAAGTCATATACCATCATGGCTTTGTTAGATGGAGGAACATTGAGAAGGCACAAGAGTTGGTTAAAGGCAGAGCCTCCAACAGTAGTGGTTGCGACAGTTGGGAGTTTATGCCAAATGCTTGAAAAACAAATTTTTTTGCTTGAAACTGTGCCAGTGCTGGTTGTTGATGAGGTTGACTTCATTTTCAATTCTTCAAAGCAAGTGAGTTCTCTTCGAAAGATTTTGACTTCATATTCATCTTGCAATAAACGTCAGACAGTTTTTGCCAGTGCATCTATACCACAGCACAAACGATTTCTTCATGACTCTGTGCAGCAGAAATGGACTAAGAGTGATGTGGTCCATATTCATGTCAGTGCAGTAGAACCCATGCCATCTCGCCTATATCATAGATTTATAATGTGTGATACCAAAAGAAAACTACAAACCCTGTTATCCTTGATACAATCCGATGCACCTGAGTCTGGCATTATATTTGTTGGTGAGCAGTCTGAGAAGTCGAAAAAGGCTGGAAATGCTCCATCTACATCCCTTGTGATTGACTTTCTGAAGACATCATATCAAGGTTCATTAGATATCCTCCTTCTCGAGGATGACATGAATTTCAATGCAAGAGCAGCTTCACTGTTGGAGGTTAGAAAAGGAGGTGGCTATCTCCTAGTGGCGACAGATATAGCTGCCCGAGGAGTTGACCTTCCAGAAATGTCTCACATTTACAACTTTGATCTGCCTAGAACTGCCATAGATTATCTTCACCGAGCAGGGAGGACTTGTAGAAAACCCTTCTCTGACATGAGATGTACTGTTACCAGCATTATAGTTCCAGAGGAGCGGTTTGTTCTGCAGAGATATGAAAATGAGTTGATGTTCAACTGTGATGAGCTTATTCCATAG 957 0.4211 MQVTKVARMLAAKPTGVEGEQKSYTIMALLDGGTLRRHKSWLKAEPPTVVVATVGSLCQMLEKQIFLLETVPVLVVDEVDFIFNSSKQVSSLRKILTSYSSCNKRQTVFASASIPQHKRFLHDSVQQKWTKSDVVHIHVSAVEPMPSRLYHRFIMCDTKRKLQTLLSLIQSDAPESGIIFVGEQSEKSKKAGNAPSTSLVIDFLKTSYQGSLDILLLEDDMNFNARAASLLEVRKGGGYLLVATDIAARGVDLPEMSHIYNFDLPRTAIDYLHRAGRTCRKPFSDMRCTVTSIIVPEERFVLQRYENELMFNCDELIP 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00062 318 Pfam Helicase conserved C-terminal domain 161 280 IPR001650 -
Gabi4470g00062 318 Gene3D - 146 316 IPR027417 -
Gabi4470g00062 318 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 1 132 IPR014001 -
Gabi4470g00062 318 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 161 318 IPR001650 -
Gabi4470g00062 318 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 47, MITOCHONDRIAL 2 309 - -
Gabi4470g00062 318 SMART helicmild6 198 282 IPR001650 -
Gabi4470g00062 318 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 305 IPR027417 -
Gabi4470g00062 318 CDD SF2_C_DEAD 151 280 - -
Gabi4470g00062 318 Gene3D - 1 138 IPR027417 -
Gabi4470g00062 318 Pfam DEAD/DEAH box helicase 25 116 IPR011545 GO:0003676|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4470g00062 Gabi-Chr4470 479983 484978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00062 32 307 Eukaryotic Initiation Factors Gene Family AT1G72730 26.736 1.36e-15 75.1