Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00059 ATGATATCCTTTGTCAAGTACACAGCATCGCCACTGAGCAGCATTGCTTCCTCCACCATAAAACTTCCTGTTCCAAGGACTCAACATTGCACGTTACCCACTATTCAGAATGTTCAACAAAGCACTGAGTCCTCCCTCTCTTCCCTGAAACCTATTTACATTTCATCGACTGTGAATTTCAAACTGTCAACAAATCTCAGAAGGGGTGTTACAGAATGCCAGGCCTACGAAGCAGATAAGTCACGGCCACTAGAGATTAACATTGAGCTTCCTGGGGAACAGGCAGGGGCAGATGCTGCTCAAAAGCTCAAAATTGGTTTGTATTTTGCAACATGGTGGGCTTTGAATGTGGTCTTCAACATATACAACAAGAAGGTTTTGAATGCTTTTCCTTATCCATGGCTTACTTCCACTTTGTCCCTCGCGGCTGGCTCTCTCATCATGTTAATCTCTTGGGCCACAAGGGTTGCTGACGTCCCAAAAGTTAATTTGGATTTTTGGAAGGCCCTCTTTCCTGTTGCGGTGGCACACACAATTGGGCATGTTGCAGCTACTGTGAGTATGTCCAAAGTTGCAGTTTCATTTACTCACATCATAAAGAGTGGAGAGCCTGCTTTCAGTGTCCTGGTATCCAGGTTCTTGCTTGGGGAAGCATTCCCTATGCAGGTTTACCTGTCACTGATGCCTATTATTGGAGGTTGTGCACTTGCTGCTGTGACGGAGCTCAATTTCAATATGATTGGATTTATGGGAGCTATGATATCAAATCTGGCATTTGTCTTTAGGAATATATTCTCAAAGAAGGGAATGAAAGGGATGTCTGTTAGTGGAATGAACTATTATGCTTGCCTTTCCATATTGTCTCTATTGATCCTCACACCTTTTTCCATTGTTGTTGAGGGCCCAAAGATGTGGGCTGCTGGCTGGCAAACTGCCCTGTCTAATATTGGTCCCAATTTTGTCTGGTGGGTAGCTGCACAGAGTGTGTTCTACCACTTGTACAATCAAGTCTCTTACATGTCTCTTGATCAGATTTCTCCCTTAACATTTAGCGTAGGAAACACAATGAAGAGAATTTCGGTAATTGTGTCTTCTATCCTTATCTTCCACACTCCAATTCAGCCTGTCAATGCCCTAGGGGCCGCCATTGCAATTCTTGGCACCTTTCTCTATTCACAGGTGCATTCCCATTTACTCTATTTTTGTTTGCTTATACTAGATACTATCTGTTTGAGACAAATTAAAAGCAATGATTAA 1257 0.4304 MISFVKYTASPLSSIASSTIKLPVPRTQHCTLPTIQNVQQSTESSLSSLKPIYISSTVNFKLSTNLRRGVTECQAYEADKSRPLEINIELPGEQAGADAAQKLKIGLYFATWWALNVVFNIYNKKVLNAFPYPWLTSTLSLAAGSLIMLISWATRVADVPKVNLDFWKALFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGEAFPMQVYLSLMPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKKGMKGMSVSGMNYYACLSILSLLILTPFSIVVEGPKMWAAGWQTALSNIGPNFVWWVAAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSILIFHTPIQPVNALGAAIAILGTFLYSQVHSHLLYFCLLILDTICLRQIKSND 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00059 418 PANTHER SOLUTE CARRIER FAMILY 35 104 394 - -
Gabi4470g00059 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 239 - -
Gabi4470g00059 418 SUPERFAMILY Multidrug resistance efflux transporter EmrE 295 392 - -
Gabi4470g00059 418 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 103 396 IPR004696 GO:0016020|GO:0022857|GO:0055085
Gabi4470g00059 418 Pfam Triose-phosphate Transporter family 103 392 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4470g00059 Gabi-Chr4470 464323 466682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00059 17 403 Antiporters AT1G61800 76.410 0.0 580
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00059 K15283 K05350 gmx:100820126 658.292