Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00048 ATGGACACTGAGGAACCTCCTTCACCGTATCTCCATTCTTCTTCTTCTTCTTCTTCTTCGCTACTCAAAGACATCTCCAATTTCAGAACCCCTAAACGCCCTTCTCTTTCTCTATCTCTCAACACCCAATCTCCCTCCACTCAATACTTCACCGCCTCTAAATCCAAACAATCCACCACCGCATTCCGCCGCCGCACCAACAAGTCAGGTGCCGCCGCCGCTCGCAAACTCAAGGCTTTCCAACTAGAGCAGTCCCAGTCTTCCAGAAAGGCCCAAATCAAGAAGGAGCAGTCCCTCAAATCCCTAGCCAAGTCCATCACTGTTTGGCTTAATTTCTTGCTCGAAAACCCTGCCTCCTGCGGTTGCGACTTGTCCATCGCCGGAGTCCACATCGGCGATGCCACTCCGGCCACCAAGGGCAAGAGAGACAGCCGCCCCGGAATTTCCGTTGGGGTTGATTCCACCTGGCGAACTCCGAAGCGGCAGAGGAAGACGTGGTCACGTGCTGAGGGTGATGAAAATGCTGCTTCTGCGGCGGAGTTGCCAAATTCCTTGTTCTCGTACTTGAAGGATTCTCTGAAGGATGTCTGCAGTTTCGAGGATTTGAAGCAGCGAATGAGGGTTTATCTGAGCCTCGGAACTTGTAAAGATATCTTCCAAGTGATGAATCAAGTCTCGAAGGCAATTGACGAAGGAAGGCTAAATTTGAGGGCACACTGCCCGATAGTAACAGATGTTGGGTTGAAGGATAAGGCCACAAGAATACTCATGTGTTATAATCCAATTTGGCTGCGAATCGGATTGTATATTATTTTTGGTGGGGACTCCTTGGTATTGAATGGAGATGCTGATCCTGGCCATGATGTCATATTTTTGAAAATGGTCATTGACAAGCTGTTTTTTTCACATGAGGGTCTAGCAAAAGCATATGCATATAACAAGATGGTTGAAGGTGTATATAGGTCGGGTTACTATGAGAATCTGGGGAATGTGATTTTGAAGAGAATTTTGTTACTTGTGCTTATCCTAGATAAAGCTAAATGTCAAAGTTGCCTCCCACTTGAGTACGGTATTGATGGATTAGATGGGGGTTCCCCTTTATTATTCAAAGCAGAATCATGGATTAAATCAAGTAGTCAAGTGATCCATGAATTTCTGTCATCCGATGTAATGCATGGAGAAGGCAATCTTCTAGCACATTTGATGATTTTAGGTTACAAAATATCTCATCAACAGGGGCCTCTTGTTGAGTATGATTTTAGGGTCAGAGACTTATTTGTAGATCTCCAAGATGGACTAAAACTCTGTAGAGCTATTCAGCTCTTGCAACATAATTCTTCTATCCTCATGAAAATTGTAGTTCCCTCAGATACTCCTAAGAAAAATTTGGCGAACTGTGGCCTTGCCCTACAATATCTTAGGCAAGCGGGTGTGTCACTACATGATGAGGATGACACGATGATTATGGCAGATGATATTGTTAATGGAGACAAAGAACTTACACTTTCCTTGCTCTGGAATATGTTTGTTCATTTGCAGCTACCTCTTTTGGTTGATAAAACAATTTTAGCTGGGGAAATTTCTATAATTCGAGGACTTGGCGCAGATCTGATAAACAGTACAAATTCTAGTTCTCTGGAATTGCTTTTGAATTGGATTCAGGCTGTTTGTAACAATTATGATTGTGCAATTGACAATTTTCATTCCCTTGTTGATGGCAAAGCTATCTGGTGCTTACTTGATTATTACTTTCAGAAGGAACTTCATAATTCCTGTTCATTGAAGGAAGTTAATAAGAAAAGTGGTAAGGGATCAATTATGTCGGTCAGTGAATATTCAGATGCACTGTACAATTTTATTTTGTCCCAGAAGTTAACTACGTTACTGGGGAATTTTCCAGAGGTACTTCAAATAAGTGAGCTACTTCAATATAATGGTGCTTGCAGTGATCGAAGTGTGGTGATATTGTTGGTTTTCTTAGCAAGCCAACTATTTGTCAAGAAAAATATGGATCAATTAAATTTCCATAAGCTCTTGGGCTATGACTGTCAAAGTCCGCACCGTAGACATTTGAGGATGGTAGAAAGTTTTGAATCAGTACAACAGCCTGATGCTTCAGATGTGCATGTCAATGAAGATGCCGCAAGAAAATTCAAGGCCATCCAGGCTTGGTGGCAAGATATGGCTGAACGAAACCGTATCATGAAACCAATTGGCTCTAATTTGCAGAGATCCAGGACCACTGAGCGCAGCACCGATATTATAAGTGAAAATGCTGCAACAACAATACAATCACATATCAGAGGATTGGTTGTGCGGCACAAGTTTCTGAAGAAGGTAAATGCTGTTACCCTTTTGCAAACTGTTTTCAGAGCTTGGCTAAAAGTGAGGCAGGAGTCAGATTGCATGACATTTACTACCGTTCAAGTCTATGACTTTTCATGTGAAATATTGAAGAAATCAGAAACATATAAGAGATATGCCATGCTTTTCGTTCATAGGCATTCTTTTTTGAGGTTGAAGAGGTCAGCACAGCTTATCCAACAGGCAGTGAGGAGTTGGCTCCATCGGAGGCATCAGCAAGGATGTAGTATAAGTCCTGATCTTATGATTTCAGATAGGGTGACTGCTGCCACTACTGTTCAGAAATTTGTTCGTGGTTGGATGGCTCGATATAGATATATTCGTCAACTAGATCAGAAGGAGAAAGCTTTGAATTTAGCCCAACATAAAGTTACATTTGATCTTCAAACAAATGCAGCCGTTAGCATTCAACTTGCTTGGAAAAAGTTCATATGCTGCAAGTCTAAACGGAAGCAGCATTTTCTTGCAACTAAAATTCAATGTAATTTCCGTAGGTGGATATTGAGGAAAAGATTTTCAAGTCAGATTCAAGCTGTTATAAAAATTCAATCTTATTTTCGAATGTGGAGATGTGTAAATGCTTTTCGGCACTTCAAAATTGCGCATAAGGCAGCTATTTTCATTCGATCTTTATTACGTGGATGGATTGCACGGAAGGCAGTTTGTGCACGTAAGAATAGCATTGTTGAAATTCAAAGACATTGTCGTGGTTGGCTTGTGAAACGGGACTTCTTGTTCCAAAGAGACGCTGTAGTAAAAATTCAGTGTGTCATTCGAAGCCTGGAATGCCAGAAAGCTCTTAATTTTCAGAAAGATGCTGCTTTGGAGATTCAGCGCTTTATCAGAGGGCATATAACTCGAAATCGGCTATTAGGTAGTGCATCCCAGTTACGCGCTGTCGTTCCTGTTAGTTGCATTTCAAGGCCTGTTGGCTTTTATAGTTTTCAACTGGAACAATTATTGTTTTCCGTTATGAAATTGCAACGATGGTGGAAGGGTCTCTTGTTGCTTAAATTGATGAATAAGTCGGCCATCATTATTCAGTCTTGTACTCGTCGGAGGATAGCCAGGCGAAAGGCCACTGTTCACAGACACCATGATGTTGCCATCCAAGCTCTCAATTTCCAGGAAGTAGCTGCGTTGGAGATCCAGCGCTTTATTAGGGGGCATTTAACTCGAAATCGGATATTAGGCGGTGCTTCTAAGCTACTTGCAGCCATTTCTGTTGGTTGCATTTCAAGACCAGCTGGCTGTTGTAGTTTCCAACTCGAACTATTCTTGTTTTCAGTTGTGAAATTGCAACGATGGTGGAAGGGTCTCTTACTAAATAATTTGATCACGAAGTCTGCCATTATTATTCAGTCTTGCACTCGTGGGTGGATAGCCAGGCGGGAGGCTGCTGTTTGTAGACATCATATCGTTGTCATTCAATCCCACTGGAAAGGTTACCTTGCACGTAAAGAGTCAAGAGAACATCTATTGGATTTGCGCTTGAGAGTGCAGGAGTCTGCCAGAAATGTGGATGACAGCAAGCGTCTCATAAACAGACTCTTGGCAGCGCTTTCAGAGCTACTTCATATGAAGAGTCTTAGTAACATCCTTCATACTTGTTCAACATTGGATATGGCTACCGGACATTCTCAGAAATGTTGTGAAGAGCTTGTGGCTGCAGGGGCTATAGACACCTTGCTGAGGCTTATTCGATCAGTCAGCAGGAGTATACCTGATCAGGAGGTTCTTAAGCATGCTTTGTCAACTCTCCGAAATCTCTCCCGCTACCCTCATCTACTACAAGTGCTGATCCAAAGTCACGATTCTGTGCAGATAATCGTCTTGGAGTTACTAAGGAATAAGGAGGACGGCTACTTCATTGCTTCTGAACTTTTGAAGAGGATATGTTCCACTCATAAAGGAGTTGAGGTCATACTGAAGTCCCCTGCCCTACTAAAACGATTGCACACTCTTGTTGAGGAGCTTACAAGGAAGGCAATTTATGAGAAAAGAATTGCTAGGGGTCCTAGTCCTAGTCCAGTTATTAGAGAAAACAGAGAGAGAAGATTGAAGGAAGCTGCTGACATTCTGAAGCTCATAACCAGCGCCTGA 4467 0.4236 MDTEEPPSPYLHSSSSSSSSLLKDISNFRTPKRPSLSLSLNTQSPSTQYFTASKSKQSTTAFRRRTNKSGAAAARKLKAFQLEQSQSSRKAQIKKEQSLKSLAKSITVWLNFLLENPASCGCDLSIAGVHIGDATPATKGKRDSRPGISVGVDSTWRTPKRQRKTWSRAEGDENAASAAELPNSLFSYLKDSLKDVCSFEDLKQRMRVYLSLGTCKDIFQVMNQVSKAIDEGRLNLRAHCPIVTDVGLKDKATRILMCYNPIWLRIGLYIIFGGDSLVLNGDADPGHDVIFLKMVIDKLFFSHEGLAKAYAYNKMVEGVYRSGYYENLGNVILKRILLLVLILDKAKCQSCLPLEYGIDGLDGGSPLLFKAESWIKSSSQVIHEFLSSDVMHGEGNLLAHLMILGYKISHQQGPLVEYDFRVRDLFVDLQDGLKLCRAIQLLQHNSSILMKIVVPSDTPKKNLANCGLALQYLRQAGVSLHDEDDTMIMADDIVNGDKELTLSLLWNMFVHLQLPLLVDKTILAGEISIIRGLGADLINSTNSSSLELLLNWIQAVCNNYDCAIDNFHSLVDGKAIWCLLDYYFQKELHNSCSLKEVNKKSGKGSIMSVSEYSDALYNFILSQKLTTLLGNFPEVLQISELLQYNGACSDRSVVILLVFLASQLFVKKNMDQLNFHKLLGYDCQSPHRRHLRMVESFESVQQPDASDVHVNEDAARKFKAIQAWWQDMAERNRIMKPIGSNLQRSRTTERSTDIISENAATTIQSHIRGLVVRHKFLKKVNAVTLLQTVFRAWLKVRQESDCMTFTTVQVYDFSCEILKKSETYKRYAMLFVHRHSFLRLKRSAQLIQQAVRSWLHRRHQQGCSISPDLMISDRVTAATTVQKFVRGWMARYRYIRQLDQKEKALNLAQHKVTFDLQTNAAVSIQLAWKKFICCKSKRKQHFLATKIQCNFRRWILRKRFSSQIQAVIKIQSYFRMWRCVNAFRHFKIAHKAAIFIRSLLRGWIARKAVCARKNSIVEIQRHCRGWLVKRDFLFQRDAVVKIQCVIRSLECQKALNFQKDAALEIQRFIRGHITRNRLLGSASQLRAVVPVSCISRPVGFYSFQLEQLLFSVMKLQRWWKGLLLLKLMNKSAIIIQSCTRRRIARRKATVHRHHDVAIQALNFQEVAALEIQRFIRGHLTRNRILGGASKLLAAISVGCISRPAGCCSFQLELFLFSVVKLQRWWKGLLLNNLITKSAIIIQSCTRGWIARREAAVCRHHIVVIQSHWKGYLARKESREHLLDLRLRVQESARNVDDSKRLINRLLAALSELLHMKSLSNILHTCSTLDMATGHSQKCCEELVAAGAIDTLLRLIRSVSRSIPDQEVLKHALSTLRNLSRYPHLLQVLIQSHDSVQIIVLELLRNKEDGYFIASELLKRICSTHKGVEVILKSPALLKRLHTLVEELTRKAIYEKRIARGPSPSPVIRENRERRLKEAADILKLITSA 1488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 1164 1193 IPR000048 GO:0005515
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 940 969 IPR000048 GO:0005515
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 1012 1041 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam Calponin homology (CH) domain 421 511 IPR001715 GO:0005515
Gabi4470g00048 1488 Gene3D - 408 513 IPR036872 -
Gabi4470g00048 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 990 1066 IPR027417 -
Gabi4470g00048 1488 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1346 1379 IPR000225 GO:0005515
Gabi4470g00048 1488 ProSiteProfiles Calponin homology (CH) domain profile. 391 513 IPR001715 GO:0005515
Gabi4470g00048 1488 PANTHER UNCHARACTERIZED 876 1126 - -
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 756 784 IPR000048 GO:0005515
Gabi4470g00048 1488 MobiDBLite consensus disorder prediction 1 68 - -
Gabi4470g00048 1488 SMART iq_5 1163 1185 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 1057 1079 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 755 777 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 939 961 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 962 984 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 1256 1278 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 873 895 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 1127 1149 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 1011 1033 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 988 1010 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 778 801 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 1233 1255 IPR000048 GO:0005515
Gabi4470g00048 1488 SMART iq_5 839 861 IPR000048 GO:0005515
Gabi4470g00048 1488 CDD CH_ASPM_rpt1 397 508 - -
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 874 903 IPR000048 GO:0005515
Gabi4470g00048 1488 MobiDBLite consensus disorder prediction 8 66 - -
Gabi4470g00048 1488 Gene3D - 1125 1194 - -
Gabi4470g00048 1488 Gene3D - 756 805 - -
Gabi4470g00048 1488 Gene3D - 938 989 - -
Gabi4470g00048 1488 Gene3D - 1037 1087 - -
Gabi4470g00048 1488 Gene3D - 990 1036 - -
Gabi4470g00048 1488 Gene3D - 1234 1281 - -
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 989 1018 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam Armadillo/beta-catenin-like repeat 1335 1380 IPR000225 GO:0005515
Gabi4470g00048 1488 Gene3D - 538 668 IPR036872 -
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 1258 1285 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1261 1276 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 965 983 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1014 1032 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 990 1008 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1130 1147 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 944 960 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1060 1078 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 877 894 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1235 1253 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 1167 1183 IPR000048 GO:0005515
Gabi4470g00048 1488 Pfam IQ calmodulin-binding motif 758 776 IPR000048 GO:0005515
Gabi4470g00048 1488 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1217 1280 IPR027417 -
Gabi4470g00048 1488 Gene3D - 1284 1458 IPR011989 -
Gabi4470g00048 1488 SMART arm_5 1335 1380 IPR000225 GO:0005515
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 1058 1087 IPR000048 GO:0005515
Gabi4470g00048 1488 ProSiteProfiles IQ motif profile. 1234 1261 IPR000048 GO:0005515
Gabi4470g00048 1488 SUPERFAMILY ARM repeat 1303 1445 IPR016024 -
Gabi4470g00048 1488 SUPERFAMILY Calponin-homology domain, CH-domain 338 588 IPR036872 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00048 984 1160 Myosins gene family AT5G43900 24.865 9.92e-06 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00048 K16743 - gmx:100817636 1745.71