Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4470g00037 ATGGCTCCCAAAGCTTTCATCTTTTTGGCTTTGTTATCCTTTTCAGCATTGTCCTTGAATCCTTCTTTTGCACGGGATGAGCAAGATACTACTGGCCTTGTTATGAACTTCTACAAGGAAACATGCCCTCAGGCTGAAGATGTTATCAGAGAACAAGTCAAGCTTCTCTACAAGCGCCACAAGAACACTGCTTTCTCTTGGCTCAGGAACATTTTCCATGATTGTGCTGTTCAGAGTTGTGATGCTTCACTGTTGCTGGACTCAACAAGAAGGAGCTTGTCTGAGAAGGAGACAGACAGGAGCTTTGGTTTGAGGAATTTCAGGTACATTGAGACCATCAAAGAAGCTGTGGAGAGGGAGTGTCCTGGAGTTGTTTCCTGTGCTGATATCCTTGTACTTTCTGCCAGAGATGGCATTGTTGCCCTAGGAGGTCCTCATATCCATCTTAAAACTGGAAGAAGGGATGGTAGAAGGAGCAGAGCAGATGTGGTTGAGCAGTTCCTTCCAGACCACAATGAATCCATTTCTGCAGTTCTTGACAAATTTGGTGCCATGGGAATTGACACCCCCGGCGTGGTTGCATTGCTTGGAGCACACAGTGTGGGTCGAACTCACTGTGTGAAGTTGGTGCACCGTTTGTACCCAGAGGTTGATCCAGTGCTCAATCCTGATCATGTCCCACACATGCTCAAGAAGTGCCCTGACGCCATTCCAGATCCTAAGGCTGTGCAATACGTGAGAAACGATCGTGGCACGCCCATGGTTCTAGACAACAACTATTATAGGAATATCTTGGACAACAAGGGTCTGTTGATAGTGGATCACCAATTAGCCAAAGACAAGAGGACCAAGCCTTATGTTAAGAAAATGGCCAAGAGCCAGGACTATTTCTTCAAGGAGTTTTCTAGAGCTATTGCCTTGCTTTCTGAAAACAATCCCCTCACTGGCACAAAGGGTGAGATCAGAAAACAGTGCAATGTTGCCAACAAGCACTATGAGGAGGAGCCTTAA 1011 0.4619 MAPKAFIFLALLSFSALSLNPSFARDEQDTTGLVMNFYKETCPQAEDVIREQVKLLYKRHKNTAFSWLRNIFHDCAVQSCDASLLLDSTRRSLSEKETDRSFGLRNFRYIETIKEAVERECPGVVSCADILVLSARDGIVALGGPHIHLKTGRRDGRRSRADVVEQFLPDHNESISAVLDKFGAMGIDTPGVVALLGAHSVGRTHCVKLVHRLYPEVDPVLNPDHVPHMLKKCPDAIPDPKAVQYVRNDRGTPMVLDNNYYRNILDNKGLLIVDHQLAKDKRTKPYVKKMAKSQDYFFKEFSRAIALLSENNPLTGTKGEIRKQCNVANKHYEEEP 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4470g00037 336 PRINTS Haem peroxidase superfamily signature 191 206 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Haem peroxidase superfamily signature 143 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Haem peroxidase superfamily signature 125 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PANTHER - 22 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 ProSiteProfiles Plant heme peroxidase family profile. 32 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 190 202 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 124 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 143 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 105 118 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 Pfam Peroxidase 50 293 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 Gene3D - 36 329 - -
Gabi4470g00037 336 FunFam Peroxidase 169 308 - -
Gabi4470g00037 336 CDD secretory_peroxidase 32 327 IPR033905 GO:0004601|GO:0042744
Gabi4470g00037 336 SUPERFAMILY Heme-dependent peroxidases 33 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4470g00037 336 Gene3D Peroxidase, domain 2 169 308 - -
Gabi4470g00037 336 FunFam Peroxidase 36 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4470g00037 Gabi-Chr4470 272868 274994 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4470g00037 1 332 Peroxidase AT4G21960 78.916 0.0 556
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4470g00037 K00430 - gmx:547513 604.749