Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4465g00001 ATGGACAAGACTGAGAGAGAAACCCATGACTTCATGAACGTTGAATCTTTCTCCCAACTCCCCTTCATCCGTCCTGCACCTCCCGCCCTCAAAGAAAAGGGCATTCGACTCTTCGGCATAGAATTCGGCGGCGTCAACGCCGCCGGTGCAACCGCCGCCGAAGAATCCGAGTCAGCAGAAACAATCACCAACAACAACAACAATGCATTTGAATTTGACAGCAACAAGGACAACAATAATAACAACAACACGGAGAACGGAGAGAGTAGCCGCAGATTCGAATGCCATTACTGTTGCAGAAACTTCCCTACTTCTCAAGCCTTAGGTGGTCACCAAAACGCACACAAAAGAGAACGCCAACATGCAAAACGACAACACCTTCAATCAGCCATGGTTCACAGTACTTTCTCCGATGCACAAGTTTATGGCCTCATGAACTATAGGTTCAACTCAGCTCCAACAACTACACTACCATATCCAATGTGGAATAGCACCACCACCACCTCAAGTGCCACCATAACCACAAATAATGGTGGTGGAAGGTTTTATGGAAGCCATGGAAATGGAACCTCTTATTCTCACCATCAACAAGAACCCATCAATGGAAGCCCCTTGGCCTTTTGGCGAATCCCCAATGGCACAACCCTTCAGAGTAACCCTAGTTTCAACCATGAACAACGATCGTTGCATCAGCATCATCATCATCATCATCCTCCATTACCCTTGTTTTCTGGCGAGGAAATGAATAATAATAATAACAACATGAGGATCTCACAAGTTGGAGGAGCTTCTGGTTCTTCACAAAACCGCTACGTTTATGACTCAAAACGCAGCGTTCAAGACCATGTGAGTTTGGATCTTCATCTGTAA 870 0.4586 MDKTERETHDFMNVESFSQLPFIRPAPPALKEKGIRLFGIEFGGVNAAGATAAEESESAETITNNNNNAFEFDSNKDNNNNNNTENGESSRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRQHLQSAMVHSTFSDAQVYGLMNYRFNSAPTTTLPYPMWNSTTTTSSATITTNNGGGRFYGSHGNGTSYSHHQQEPINGSPLAFWRIPNGTTLQSNPSFNHEQRSLHQHHHHHHPPLPLFSGEEMNNNNNNMRISQVGGASGSSQNRYVYDSKRSVQDHVSLDLHL 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4465g00001 289 MobiDBLite consensus disorder prediction 66 89 - -
Gabi4465g00001 289 ProSitePatterns Zinc finger C2H2 type domain signature. 95 115 IPR013087 -
Gabi4465g00001 289 MobiDBLite consensus disorder prediction 216 269 - -
Gabi4465g00001 289 MobiDBLite consensus disorder prediction 245 269 - -
Gabi4465g00001 289 SUPERFAMILY beta-beta-alpha zinc fingers 90 121 IPR036236 -
Gabi4465g00001 289 PANTHER ZINC FINGER PROTEIN GIS 1 289 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Gabi4465g00001 289 MobiDBLite consensus disorder prediction 66 88 - -
Gabi4465g00001 289 Gene3D Classic Zinc Finger 66 142 - -
Gabi4465g00001 289 ProSiteProfiles Zinc finger C2H2 type domain profile. 93 120 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4465g00001 Gabi-Chr4465 11226 12385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4465g00001 1 289 C2H2 Transcription Factor Family AT3G58070 40.203 1.44e-44 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4465g00001 - - vun:114190818 292.352