Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00083 ATGGCGGAAGAACACAGATGCCAAGCTCAGCGCCTCTGCGCCAACAATTGCGGTTTCTTTGGCAGCACCGCCACGCAGAACCTTTGTTCGAAGTGCTACGGCGATTTGCAGCTCAACGAACAACAATCTTCCTCCGCCAAGCTCGTCCTCAATCAATCGCTAGCCTCTCCTCGTTCTCCGGCGGTGGTTTCTCAGCCGTCTTCTTCGTCGCCTTCTGAGGATGTGGTTGATCCGCCGCCACGCGCTGCGGAGGAGGCGAAGCCTCCTTCGCAGCACCAGCAGAACCGGTGCATGACGTGCCGGCGGCGCGTGGGACTCACGGGATTCAAGTGCCGGTGCGGGTTGACGCTTTGCGGGACCCACCGTTACCCGGAGCAGCACGGTTGCGAGTTCGACTTCAAGGGGCTTGGGAGGGAGCAGATCGCGAAGGCGAATCCGGTGGTGAAGGCTGAGAAGCTCGAGAAGATCTGA 471 0.603 MAEEHRCQAQRLCANNCGFFGSTATQNLCSKCYGDLQLNEQQSSSAKLVLNQSLASPRSPAVVSQPSSSSPSEDVVDPPPRAAEEAKPPSQHQQNRCMTCRRRVGLTGFKCRCGLTLCGTHRYPEQHGCEFDFKGLGREQIAKANPVVKAEKLEKI 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00083 156 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 12 59 - -
Gabi4459g00083 156 FunFam Zinc finger AN1-type containing 6 69 152 - -
Gabi4459g00083 156 PANTHER AN1-TYPE ZINC FINGER PROTEIN 10 156 - -
Gabi4459g00083 156 Pfam A20-like zinc finger 11 33 IPR002653 GO:0003677|GO:0008270
Gabi4459g00083 156 MobiDBLite consensus disorder prediction 49 94 - -
Gabi4459g00083 156 SUPERFAMILY AN1-like Zinc finger 84 151 IPR035896 -
Gabi4459g00083 156 SMART A20_3 10 34 IPR002653 GO:0003677|GO:0008270
Gabi4459g00083 156 ProSiteProfiles Zinc finger A20-type profile. 7 41 IPR002653 GO:0003677|GO:0008270
Gabi4459g00083 156 ProSiteProfiles Zinc finger AN1-type profile. 91 137 IPR000058 GO:0008270
Gabi4459g00083 156 MobiDBLite consensus disorder prediction 49 74 - -
Gabi4459g00083 156 SMART AN1_Zf_4 97 134 IPR000058 GO:0008270
Gabi4459g00083 156 Gene3D - 71 152 IPR035896 -
Gabi4459g00083 156 Gene3D - 1 70 - -
Gabi4459g00083 156 Pfam AN1-like Zinc finger 97 133 IPR000058 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00083 Gabi-Chr4459 777021 778009 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00083 1 156 C2H2 Transcription Factor Family AT3G52800 55.294 1.14e-49 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00083 - - gmx:100807363 234.187