Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00073 ATGGACCCATGGCTCGACGATCTCGCCGACGACCTCCAGAGCCTAAGCTTCGCCTCCACAGCCACCACCACTGCCACCGCCGACATCAAACGGAGCACAAGCTTCGGCTCCGAAACCACCACCTTAACCGCCTCCACCTCCGCACACCTGCCAACGGCCCCATCACACCCCGCCACATCCAAACCCCACGCGCCCTCCTCCGACCCTCGCTGGGCCGCAATCCACCGGATCCGATCAGAGTCCCCCAGCCGCCGCATCCTCCCCTCCGACCTCCGTTTCTACCGTCGCTTAGGCGCCGGGGACATAAGCTGCGTATACCTTGCCGAGCTTAACGACGGCCCGGTGCCGGCGATTTTCGCCGCAAAGGTGATGGACAAGAAGGAGCTTGTGAGTCGCAGCAAAGAAGGGAGGGCGAGGACAGAAAGGGAAATACTTGAATTGTTGGATCACCCTTTCTTGCCAACTCTTTACGCCGTCATTGACGCCCCCAAATGGCTCTGCCTCCTCACCGAGTTCTGCCCCGGCGGCGACCTCCACGTCCTCCGACAACTCCAGCCCAACAAACGCTTCCTCGAACCCGCCGTCAGGTTCTACGCATCAGAGGTATTGGTGTCAATTGAATACCTTCACATGTTGGGGATAGTGTACCGTGATCTAAAGCCTGAGAACGTGTTAGTTCGATCAGACGGTCACATCATGCTGACTGATTTTGACCTCTCATTAAAATGTGATGATTCCAGACCAACGGCCCAGATCATCTCGGCTCAAAACTCTCCTCTCGTAGTTAAGGAACCCAAAGTTGAACCCTCTCAATTCACCTCCTCTTCGTGCATATTACCCAACTGTATAGTCCCTGCAGTGTCGTGTTTCCACCCAAAACGCAAGCGGAAGAAGAAGCAAAAAGAGCGTAGTGGGCCTGAGTTTGTGGCCGAGCCCATTGATGTTAGGTCCATGTCATTCGTTGGGACCCACGAGTACTTGGCTCCAGAGATCGTGTCCGGTGAGGGACACGGTAGTGCCGTGGATTGGTGGACCTTAGGGATATTTATATTTGAATTGTTTTATGGTGTCACACCCTTTAGGGGTATCGACAATGAGCTAACCCTAGCAAACATTGTGGCTCGAGCACTTGAGTTCCCAAAGGAACCCACCGTGCCAACCATAGCAAAGGACCTTATCTCACAATTATTGGTTAAGGACCCTTCGAGGAGGCTAGGGTCAACAATGGGGGCTTCCGCAATCAAGCACCACCCATTTTTTCAAGGTGTTAATTGGGCATTGCTAAGATGTACAACACCACCCTTTGTGCCCCCACCTTATACTAAAGAAGCTGTGTCTGATGAAAGTTGTCCACAGACTCCAATTGATTATTATTGA 1377 0.533 MDPWLDDLADDLQSLSFASTATTTATADIKRSTSFGSETTTLTASTSAHLPTAPSHPATSKPHAPSSDPRWAAIHRIRSESPSRRILPSDLRFYRRLGAGDISCVYLAELNDGPVPAIFAAKVMDKKELVSRSKEGRARTEREILELLDHPFLPTLYAVIDAPKWLCLLTEFCPGGDLHVLRQLQPNKRFLEPAVRFYASEVLVSIEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCDDSRPTAQIISAQNSPLVVKEPKVEPSQFTSSSCILPNCIVPAVSCFHPKRKRKKKQKERSGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFIFELFYGVTPFRGIDNELTLANIVARALEFPKEPTVPTIAKDLISQLLVKDPSRRLGSTMGASAIKHHPFFQGVNWALLRCTTPPFVPPPYTKEAVSDESCPQTPIDYY 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00073 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Gabi4459g00073 458 SMART serkin_6 91 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00073 458 MobiDBLite consensus disorder prediction 32 62 - -
Gabi4459g00073 458 CDD STKc_phototropin_like 89 439 - -
Gabi4459g00073 458 ProSiteProfiles Protein kinase domain profile. 91 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00073 458 Gene3D Phosphorylase Kinase; domain 1 90 176 - -
Gabi4459g00073 458 MobiDBLite consensus disorder prediction 32 68 - -
Gabi4459g00073 458 SUPERFAMILY Protein kinase-like (PK-like) 70 447 IPR011009 -
Gabi4459g00073 458 Gene3D Transferase(Phosphotransferase) domain 1 316 438 - -
Gabi4459g00073 458 Pfam Protein kinase domain 94 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00073 458 PANTHER FLIPPASE KINASE 1-RELATED 32 442 - -
Gabi4459g00073 458 FunFam Serine/threonine-protein kinase OXI1 177 245 - -
Gabi4459g00073 458 FunFam serine/threonine-protein kinase D6PK-like 315 438 - -
Gabi4459g00073 458 Gene3D Transferase(Phosphotransferase) domain 1 177 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00073 Gabi-Chr4459 687033 691424 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00073 1 458 AGC Kinase Gene Family AT3G44610 65.328 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gabi4459g00073 Pkinase 2.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00073 K08286 - gmx:100792738 743.036