Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00027 ATGGCTTTAACTTGGCCCCATCTGCTGAAGTTTCGTTCTCAACCTTTCTTCTCCGATCTTACCGAATCCAGCTCTCTTGAACTGCCGTACACTTATTCCCTCACCGTACTCCGCCGGAGAAAGATCTCCGTTCTGTCTTCGCCGGCGCTGAAATCCGTGAAATGCCTCAGCAGATCCACGGAGGAGAAACAGTGGAGCGATTCCGAAACCGCCGTGTCAGACTCCAATGAAGCTGGAGATAATCCAAATGATCAGGCTCCGAACCGAACTTCCGTTCCTGCAAACGATCGTGTTGAGTCTCAGAGGACTGCCACCGCATCTTCTGGCGATTCTCTCTTGCTCGGAATTCGCGAGCCTGTTTATGAAGTTGTAGAAGTGAAGTCAAATGGGACAGTATCAACAAGAAAAATCAACAGGAGAGAATTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCGTCATTGTTTTTGACAAATTCAATGCCTTCATTGCTGGTCCGTGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGAAAGATCGTGTACTTATATTTGACTATAATCGTAAAGGAGGGAAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGTTTGGAGCGGAGACTAATGGATTTAGAACCACGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGTTAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAGGGCAGGTGAGCTCAGACAGATGCTGCTTGACCTTTTGGAGGACCCCCACGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACAATTAATAAAGGAAACAATGCTATGGAATGCTCAATGCCCGTAGACAAGCAGATTGCTGAACAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGCCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATTGCTGTCAGTTTGAGGTAG 1134 0.4559 MALTWPHLLKFRSQPFFSDLTESSSLELPYTYSLTVLRRRKISVLSSPALKSVKCLSRSTEEKQWSDSETAVSDSNEAGDNPNDQAPNRTSVPANDRVESQRTATASSGDSLLLGIREPVYEVVEVKSNGTVSTRKINRRELLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDRVLIFDYNRKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGELRQMLLDLLEDPHEIRRICIMGRNCTINKGNNAMECSMPVDKQIAEQEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00027 377 MobiDBLite consensus disorder prediction 69 106 - -
Gabi4459g00027 377 Coils Coil 330 350 - -
Gabi4459g00027 377 Gene3D Magnesium transport protein CorA, transmembrane region 198 377 - -
Gabi4459g00027 377 MobiDBLite consensus disorder prediction 64 106 - -
Gabi4459g00027 377 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 91 376 IPR039204 -
Gabi4459g00027 377 Gene3D - 117 197 - -
Gabi4459g00027 377 FunFam Magnesium transporter MRS2-11, chloroplastic 116 197 - -
Gabi4459g00027 377 CDD Mrs2_Mfm1p-like 123 376 IPR039204 -
Gabi4459g00027 377 FunFam Magnesium transporter MRS2-11, chloroplastic 199 377 - -
Gabi4459g00027 377 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00027 Gabi-Chr4459 245031 250662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00027 114 376 MRS2 Gene Family AT5G22830 84.030 6.30e-152 435
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00027 K16075 - gmx:100808371 599.742