Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00026 ATGGCTTTAACTTGGCCCCATCTGCTGAAGTTTCGTTCTCAACCTTTCTTCTCCGATCTTACCGAATCCAGCTCTCTTGAACTGCCGTACACTTATTCCCTCACCGTACTCCGCCGGAGAAAGATCTCCGTTCTGTCTTCGCCGGCGCTGAAATCCGTGAAATGCCTCAGCAGATCCACGGAGGAGAAACAGTGGAGCGATTCCGAAACCGCCGTGTCAGACTCCAATGAAGCTGGAGATAATCCAAATGATCAGGCTCCGAACCGAACTTCCGTTCCTGCAAACGATCGTGTTGAGTCTCAGAGGACTGCCACCGCATCTTCTGGCGATTCTCTCTTGCTCGGAATTCGCGAGCCTGTTTATGAAGTTGTAGAAGTGAAGTCAAATGGGACAGTATCAACAAGAAAAATCAACAGGAGAGAATTGTTGAAGTCAAGTGGTCTTCGTCCACGGGACATTCGAAGTGTGGATCCGTCATTGTTTTTGACAAATTCAATGCCTTCATTGCTGGTCCGTGAGTATGCTATACTTCTAAATCTGGGTTCACTACGAGCAATAGCAATGAAAGATCGTGTACTTATATTTGACTATAATCGTAAAGGAGGGAAAGCTTTTCTAGAGTCATTGCTGCCTCGGTTGAACCCCAAGAACAACAATGGAGGGCCATCAATGCCATTTGAACTTGAGGTTGTTGAAGCAGCATTGCTTTCAAGAATACAGCGTTTGGAGCGGAGACTAATGGATTTAGAACCACGTGTTCAAGCTCTTCTTGAGGCCTTGCCAAATCGGTTAACTGGGGACATATTGGAGCAACTTCGTATTAGCAAACAAACTTTGGTTGAGTTAGGTTCTAGGGCAGGTGAGCTCAGACAGATGCTGCTTGACCTTTTGGAGGACCCCCACGAAATACGCCGTATATGTATCATGGGAAGAAACTGCACAATTAATAAAGGAAACAATGCTATGGAATGCTCAATGCCCGTAGACAAGCAGATTGCTGAACAGGAGGAGGAGGAAATTGAGATGCTTCTGGAAAATTATCTTCAAAGATGTGAATCTTGTCATGGCCAAGCTGAAAGGCTTCTTGATTCTGCAAGGGAAATGGAAGATTCTATTGCTGTCAGTTTGAGCTCACGAAGACTTGAGGTTAGCAGATTCGAACTGCTTCTCCAGGTTGGAACATTCTGTGTGGCAGTTGGTGCCCTTGTAGCAGGTATATTTGGCATGAACCTGAAGTCCTATCTTGAGGAACATGTGTTTGCATTTTGGCTGACAACAGCTGGGATAATTATTGGTGCTGTTATTGCTTTTTTTCTTATGTATTCTTACCTCAGGGCAAGGAAAATATTTTGA 1353 0.4494 MALTWPHLLKFRSQPFFSDLTESSSLELPYTYSLTVLRRRKISVLSSPALKSVKCLSRSTEEKQWSDSETAVSDSNEAGDNPNDQAPNRTSVPANDRVESQRTATASSGDSLLLGIREPVYEVVEVKSNGTVSTRKINRRELLKSSGLRPRDIRSVDPSLFLTNSMPSLLVREYAILLNLGSLRAIAMKDRVLIFDYNRKGGKAFLESLLPRLNPKNNNGGPSMPFELEVVEAALLSRIQRLERRLMDLEPRVQALLEALPNRLTGDILEQLRISKQTLVELGSRAGELRQMLLDLLEDPHEIRRICIMGRNCTINKGNNAMECSMPVDKQIAEQEEEEIEMLLENYLQRCESCHGQAERLLDSAREMEDSIAVSLSSRRLEVSRFELLLQVGTFCVAVGALVAGIFGMNLKSYLEEHVFAFWLTTAGIIIGAVIAFFLMYSYLRARKIF 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00026 450 CDD Mrs2_Mfm1p-like 123 449 IPR039204 -
Gabi4459g00026 450 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 91 449 IPR039204 -
Gabi4459g00026 450 MobiDBLite consensus disorder prediction 69 106 - -
Gabi4459g00026 450 Coils Coil 330 350 - -
Gabi4459g00026 450 Gene3D - 117 197 - -
Gabi4459g00026 450 MobiDBLite consensus disorder prediction 64 106 - -
Gabi4459g00026 450 FunFam Magnesium transporter MRS2-11, chloroplastic 199 381 - -
Gabi4459g00026 450 Gene3D Magnesium transport protein CorA, transmembrane region 198 381 - -
Gabi4459g00026 450 Pfam CorA-like Mg2+ transporter protein 333 440 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Gabi4459g00026 450 Coils Coil 239 259 - -
Gabi4459g00026 450 FunFam Magnesium transporter MRS2-11, chloroplastic 116 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00026 Gabi-Chr4459 242754 250662 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00026 114 450 MRS2 Gene Family AT5G22830 84.570 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00026 K16075 - gmx:100808371 719.539