Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00025 ATGGCGGAGGACCGCAATGAGGTCAGTGATTACAGTTCGGAGGACGAGGGCGCTGAGGATTACAGGCGTGGAGGGTACCATGCGGTTCAGATTGGGGATACTTTCAAGAATGGGTGCTATGTGGTGCAGAGCAAGCTCGGTTGGGGTCATTTTTCCACTGTTTGGCTCGCTTGGGACACTCAGAAATCGCAATATGTTGCCTTAAAAATTCAAAAGAGTGCTCAGCACTACACTGAAGCGGCAATGGATGAAATAAAGATTCTCAAACAAATTGCTGACGGGGATCCAGATGACAAGAAATGTGTTGTAAAGCTTTTGGATCACTTTAAGCATTCGGGACCTAATGGGCAGCATGTTTGTATGGTTTTTGAATTCCTTGGCGATAATCTTCTCACCCTCATCAAGTATAGTGATTATCGAGGGGTTTCCCTTCCCATGGTCAAAGAAATTTGTTTCCATATCTTGGTGGGTTTGGATTACTTGCATCGCGAGCTTTCTATAATACACACTGATTTGAAGCCAGAGAATGTCTTGCTTCTGTCTCCAATAGATCCAGCTAAGGATCCTAGAAAATCAGGTGTTCCACTTATCCTTCCAAACACCAAGGACAAGATGGTCTCCAAGAATGGGCCCATAAATGACGGTAAAAGTTTGAATGGAGATCTGACCAAGAACCAAAAAAAGAAAATGCGGAAAAAGGCTAAAAAGGCAGAGGATTATAAAGCACCTGAGCAAGATGATTGTAGTAATGATGTGAAACCAAGTGCAGAATCTGGTGAAGGTAAACCTAATAGTCCTGTGAGTAAAGATGAATCAACAAAGTCTTTTGAAACTAAGGATGATCCACAAGGAAGTCATGGTCGTAGGAGAGGTAGCTGTTCTACAAGAAAGAAGTTGCTTGGAGCCGTTGATCTTAAATGCAAGCTGGTTGATTTTGGTAATGCTTGTTGGACATATAAACAATTCACAAACGATATTCAGACAAGGCAATATAGGTGTCCTGAGGTTCTTCTTGGATCTAAATACTCAACTCCAGCAGATCTATGGTCCTTTGCTTGCATTTGCTTTGAACTTGTCACTGGCGATGTTCTTTTTGACCCTCATAGTGGTGACAACTATGATAGGGATGAGGATCATCTGGCATTGATGATGGAGCTTCTTGGAATGATGCCTCGAAAGATTGCACTTAGTGGCCGCTATTCCCGGGATTTTTTCAATAGATATGGTGATCTGAGGCACATCCGTCGGTTGCGTTTCTGGCCTCTTACAAAGGTGCTATTGGAGAAGTATGATTTCAGTGAGCAAGAAGCAAATAACATGGCTGATTTCCTTGTTCCATTACTTGATTTTGTCCCTGAAAAGAGGCCAACGGCTGCTCAGTGCCTTAATCATCCATGGATCAGCACAGTTCCTCGTACTCTTGAGCCCTCATTGACTATTGTGCAATCTGATGCTATTGATGGGGAAATGTCTGAAAAGTTGAAGAGGGAAAAGGTTGAGCAGGAGGCTGTGGAAGTTGGTATGGGGAATATGGCCATAGATGGAACTTCAAAGTCACCCAAAGAGTTCCAATCTGTGAAGCCATCAAAATAG 1593 0.4313 MAEDRNEVSDYSSEDEGAEDYRRGGYHAVQIGDTFKNGCYVVQSKLGWGHFSTVWLAWDTQKSQYVALKIQKSAQHYTEAAMDEIKILKQIADGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEFLGDNLLTLIKYSDYRGVSLPMVKEICFHILVGLDYLHRELSIIHTDLKPENVLLLSPIDPAKDPRKSGVPLILPNTKDKMVSKNGPINDGKSLNGDLTKNQKKKMRKKAKKAEDYKAPEQDDCSNDVKPSAESGEGKPNSPVSKDESTKSFETKDDPQGSHGRRRGSCSTRKKLLGAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELVTGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIALSGRYSRDFFNRYGDLRHIRRLRFWPLTKVLLEKYDFSEQEANNMADFLVPLLDFVPEKRPTAAQCLNHPWISTVPRTLEPSLTIVQSDAIDGEMSEKLKREKVEQEAVEVGMGNMAIDGTSKSPKEFQSVKPSK 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00025 530 MobiDBLite consensus disorder prediction 272 287 - -
Gabi4459g00025 530 ProSitePatterns Protein kinases ATP-binding region signature. 46 69 IPR017441 GO:0005524
Gabi4459g00025 530 SMART serkin_6 40 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00025 530 MobiDBLite consensus disorder prediction 182 293 - -
Gabi4459g00025 530 SUPERFAMILY Protein kinase-like (PK-like) 35 480 IPR011009 -
Gabi4459g00025 530 Pfam Protein kinase domain 40 179 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00025 530 Pfam Protein kinase domain 305 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4459g00025 530 CDD STKc_SRPK 29 467 - -
Gabi4459g00025 530 FunFam CMGC/SRPK protein kinase 26 125 - -
Gabi4459g00025 530 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Gabi4459g00025 530 Gene3D Transferase(Phosphotransferase) domain 1 123 468 - -
Gabi4459g00025 530 MobiDBLite consensus disorder prediction 508 530 - -
Gabi4459g00025 530 FunFam Serine/threonine-protein kinase SRPK-like protein 297 467 - -
Gabi4459g00025 530 PANTHER PROTEIN KINASE DOMAIN-CONTAINING PROTEIN-RELATED 10 489 - -
Gabi4459g00025 530 Gene3D Phosphorylase Kinase; domain 1 16 122 - -
Gabi4459g00025 530 MobiDBLite consensus disorder prediction 236 253 - -
Gabi4459g00025 530 ProSiteProfiles Protein kinase domain profile. 40 467 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00025 Gabi-Chr4459 237614 241801 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00025 1 518 EF-hand Containing Proteins AT5G22840 69.508 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Gabi4459g00025 Pkinase 3.3e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00025 K08832 - gmx:100791829 938.332