Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4459g00009 ATGGGTCAGATCCAGTATTCTGATAAGTACTTCGACGATACTTACGAGTACAGGCATGTGGTTCTGCCTCCTGAAGTTGCCAAACTGCTTCCCAAGAATCGCCTTCTCACTGAAAACGAATGGCGTGCGATTGGAGTTCAACAAAGCCGAGGGTGGGTTCATTATGCAATTCACAGCCCCGAGCCACACATAATGCTTTTCAGGAGGACTTTAAACTTTCAACAGCACCACGAAAATCTTGCCAAGTGA 249 0.4659 MGQIQYSDKYFDDTYEYRHVVLPPEVAKLLPKNRLLTENEWRAIGVQQSRGWVHYAIHSPEPHIMLFRRTLNFQQHHENLAK 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4459g00009 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Gabi4459g00009 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Gabi4459g00009 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Gabi4459g00009 82 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Gabi4459g00009 82 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Gabi4459g00009 82 SUPERFAMILY Cell cycle regulatory proteins 1 80 IPR036858 GO:0016538
Gabi4459g00009 82 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 3 79 - -
Gabi4459g00009 82 SMART CKS_2 3 72 IPR000789 GO:0016538
Gabi4459g00009 82 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Gabi4459g00009 82 Gene3D - 1 81 IPR036858 GO:0016538
Gabi4459g00009 82 FunFam Cyclin-dependent kinases regulatory subunit 1 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4459g00009 Gabi-Chr4459 111500 112136 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4459g00009 1 78 Core Cell Cycle Gene Families AT2G27970 88.462 8.15e-51 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4459g00009 K02219 - twl:120003012 162.155