Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4458g00006 ATGGAGGAGGGATCAGAGTCGAGAAAGCAAGCGAGGTTGGCAATTTTGGAACTTGCGAATATGATAAGCGTTCCAATGTCCCTAAACGCCGTCGTACGGCTCAACGTCGCCGACGCCATCTGGCAAGGCGGCTCCAACGCCCCAATCTCCGCCGCCCAGATCTTCAAACGCGTCCTTCCCGCCGGTGACGGCGACGCCGAGAACCTTCAACGCGTCCTCCGCATGCTCGCCAGTTACGGCGTCTTCGAGGAGCACCTCGACGGCGGCGAAAGGAAGTACTCACTCACCGACGTTGGCAAAACGCTCGTCACCGATGACCAAGGCCTATCCTACGCTCCTTACGTGCTCCAACACCACCAGGATGCGTTGATGAGAGCATGGCCGTTGGTACACGAGGCAGTGGTGGACCCAACGAGGGAGCCCTTCGAAAGGGCCAATGGAGAGGCAGCGTACGCGTACTACCTTAAGCAACCTGAGATGAACGAGTTAATGGTGAAGGCCATGTCAGGTGTATCAGTACCCTTCATGAGGGCCATGTTGGAGGGCTATGATGGCTTTCAAGGTGTTGAGAAGCTGGTTGACGTTGGTGGCAGCGGCGGTGACTGCCTCCGTATGATCTTGCAGAAACACCCCACCGTCAAAGAAGGGATCAACTTTGACCTACCAGAAGTAGTGGCCAAAGCACCACAAATTCCAGGCTACCGATGA 708 0.5636 MEEGSESRKQARLAILELANMISVPMSLNAVVRLNVADAIWQGGSNAPISAAQIFKRVLPAGDGDAENLQRVLRMLASYGVFEEHLDGGERKYSLTDVGKTLVTDDQGLSYAPYVLQHHQDALMRAWPLVHEAVVDPTREPFERANGEAAYAYYLKQPEMNELMVKAMSGVSVPFMRAMLEGYDGFQGVEKLVDVGGSGGDCLRMILQKHPTVKEGINFDLPEVVAKAPQIPGYR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4458g00006 235 Gene3D Vaccinia Virus protein VP39 108 235 IPR029063 -
Gabi4458g00006 235 Pfam O-methyltransferase domain 131 230 IPR001077 GO:0008171
Gabi4458g00006 235 Gene3D - 1 107 IPR036388 -
Gabi4458g00006 235 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 235 IPR016461 GO:0008168
Gabi4458g00006 235 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 109 233 IPR029063 -
Gabi4458g00006 235 SUPERFAMILY "Winged helix" DNA-binding domain 6 105 IPR036390 -
Gabi4458g00006 235 PANTHER O-METHYLTRANSFERASE 18 228 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4458g00006 Gabi-Chr4458 75985 81953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4458g00006 3 233 Monolignol Biosynthesis Gene Families AT3G53140 75.000 1.78e-123 353
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4458g00006 - - gmx:100784957 414.461