Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4458g00002 ATGTTGCCACCTTCAAAGAGGGAGTTCAAAGATATTTATGTAGTGTTTGAGCTCATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACTCGTGAACACCATCAGTTTTTTCTTTATCAGATGCTACGTGCATTGAAATATATGCATACAGCAAGTGTATATCACAGAGATCTGAAGCCCAAGAATATACTGGCAAATGCAAACTGCAAACTCAAAATTTGTGATTTTGGACTGGCAAGAGTTGCATTCAATGATGCCCCAACAACAATATTTTGGACGGATTATGTCGCTACAAGATGGTATAGAGCACCAGAACTTTGTGGGTCTTTCTCTTCTAAGTATACACAAGCAATTGATATATGGAGCATTGGATGCATTTTTGCAGAGGTGTTGACAGGAAAGCCATTGTTTCCTGGTAAAAGTGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCATCACCTGAAACTATTACAGGAGTTCGAAATGACAAGGCAAGGAAGTACCTTATGGAAATGCGGAAGAAACCTCTTGTGCCATTTGAACAGAAATTTCCAAATGCTGATCCGTTGGCACTTCGCCTAATGCAAAGGCTTTTAGCATTTGATCCAAAGGATAGGCCAACTGCTCAAGAGGCACTAGCTGATCCTTTCTTTAAGGGTTTGGCCAAAGTTGAGAGAGAACCTTCTTCTCAACCAATTTCAAAAATGGAATTTGAGTTTGAGAGGAGACGGGTGACAAAGGAGGATGTTAGGGAACTAATATATCGGGAAATACTGGAATATCATCCTCAGCTGCTTAAAGATTACATGAATGGAACTGAAGGCACAAACTTCCTCTACCCTAGTGCAATAGATCAATTCCGAAAGCAATTTGCTTATCTTGAGGAAAATCATGGTAAAAATGGCCCAGTGATTCCTCCAGAAAGGAAGCATGTCTCCCTTCCAAGGTCCACTGTTCACTCTAGTACAATTCCTCCAAGTACACAGCCATCTTTTTCTCCTTATGAGAACAAGCAAATCAAAGAAGACGCATCAAAGATTTCCAGAGCAGCAGAATCAAATTCTGGCAGTCAATTAAGGGGTTCACGACCTCCACCAAGGGTGCCAGCAGCTAGACCAGGTCGAGTTGTAGGGCCAGTTCCACGCTATGACAACGGGAGAAACATAGAAGATACTTATGACTCAAGGATCTACCGAAATACACTTCCTCAAGCAGTCTCTCCGCACTGTTTCCATAGGATGCACCCCGCTAACACAAGATCTATATCAGAAACACACAAGGATATTTCACAAGGCAATCATCAGCTCCCATCCCAGCAGTATAACATGTCAGCCAGACCAGTACCTATTGATCTTAATACCAACCCATATTACCAGCAGGGCAATAATGATCACTTAAATGATCCTGTCACTACTATTGATGCAAAACTGCTACAGGCACAATCTCAATTTGGTGCAGTTGGTGCTGCAGCAGTAGCTGTTGCCGCTCACAGGCATTCAGGGGACTTTCAGGTTGGATTGTCATAA 1551 0.421 MLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTASVYHRDLKPKNILANANCKLKICDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFSSKYTQAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPSPETITGVRNDKARKYLMEMRKKPLVPFEQKFPNADPLALRLMQRLLAFDPKDRPTAQEALADPFFKGLAKVEREPSSQPISKMEFEFERRRVTKEDVRELIYREILEYHPQLLKDYMNGTEGTNFLYPSAIDQFRKQFAYLEENHGKNGPVIPPERKHVSLPRSTVHSSTIPPSTQPSFSPYENKQIKEDASKISRAAESNSGSQLRGSRPPPRVPAARPGRVVGPVPRYDNGRNIEDTYDSRIYRNTLPQAVSPHCFHRMHPANTRSISETHKDISQGNHQLPSQQYNMSARPVPIDLNTNPYYQQGNNDHLNDPVTTIDAKLLQAQSQFGAVGAAAVAVAAHRHSGDFQVGLS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4458g00002 516 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 9 268 - -
Gabi4458g00002 516 MobiDBLite consensus disorder prediction 324 346 - -
Gabi4458g00002 516 Pfam Protein kinase domain 8 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4458g00002 516 Gene3D Transferase(Phosphotransferase) domain 1 21 249 - -
Gabi4458g00002 516 SUPERFAMILY Protein kinase-like (PK-like) 9 230 IPR011009 -
Gabi4458g00002 516 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4458g00002 516 MobiDBLite consensus disorder prediction 306 396 - -
Gabi4458g00002 516 SMART serkin_6 5 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4458g00002 516 FunFam Mitogen-activated protein kinase 21 249 - -
Gabi4458g00002 516 Gene3D Phosphorylase Kinase; domain 1 1 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4458g00002 Gabi-Chr4458 9880 20330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4458g00002 1 509 MAP Kinase Gene Family AT1G53510 67.992 0.0 656
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Gabi4458g00002 Pkinase 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4458g00002 - - gmx:100800878 878.626