Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4456g00001 ATGAAGCAGATGTGGACACAGTTAGGTTCATTCATGGCCACCTGCATGTTCTTGTATACCATATTTATGCGGTTATTTCCCCCTCCTGTTCGTGCTCATGTTCGAAAGTACATTCACAAATTCACCAGATTCGTGTATCCTTATATCATAATCACAGTCCATGAATTCACAGGTGAACAACTCATGAGAAGTGAAGCTTACACTGCCATCCAAACCTACCTTAGTGAACACTCTTCCCAAGGAGCCTCAAGACTCAAAGCTGAAGTTGTCAAAGACAGCAACACCCCATTGGTTCTTAGCATGGATGATAATGAAGAGATCATACAAGAGTTTCAAGGTGTTAAACTTTGGTGGGCTTCACACAAGTCCACCCCCAAAACACCAAAATTCTCTATTTACCCTGCTTCAGATGAGAAAAAGTACTACAAGCTCACCTTTCACAAGCGTTATAGAGAATTAATCACTGAGTGTTACCTCAAACATGTCTTGGAAGAAGCCAGGGTTATTGAGATGAAGAACAGGCAGCTGAAAATGTACACAAACAATAAGACAAAGTGGAGTCATGTGATTTTTGAGCATCCTGCTACATTTGAAACACTAGCACTCAACCCAAAGAAGAAGGAGGATATTATCAATGACCTTGTTAAGTTCAAACTGGGAAAAACTTACTATGCTAAGATTGGGAAGGCTTGGAAGAGAGGGTATTTATTATATGGTCCTCCAGGTACTGGGAAATCTACCATGATAGCTGCCATGGCTAATTTCATGAACTATGATGTGTATGATCTTGAATTGACTGCGGTGAAGGACAACTCTGATCTGAGACAACTACTGATCAACACGCCGGGTAAGTCAATTATAGTTATTGAAGACATTGATTGCTCACTTGATCTTACTGGCCAAAGGAAGAAGAAAAAAGAAAGATTGGAAGGTAAAGAAGATTGTGATGATAAAGGGAGCAAAGTAACTCTTTCTGGGTTATTGAATGTTATAGATGGGATTTGGTCAGCATGTGGGGGAGAGAGGATCATGGTTTTCACAACTAATTTTGTGAAAAAACTTGACCCTGCTTTGATTAGGAGAGGAAGGATGGATATGCACATAGAATTGACCTATTGTTGCTATGAAGCATTTAAGGTGCTTGCAAAGAATTACTTGGATATTGAGTCCCACCATTTGTTTCCTAGAATTAAGAACTTGTTGGAAGAGACAAAGATGACCCCTGCTGCTGTTGCTGAGAACCTGATGCCAAAGTCACTGAATGAAGAAGTGGACACTTGTTTGCAGAACTTGATTCAAGCTCTTGAGACGTCCAAGGAAGTTACAAAGAAAGCAGAGGAGAAAGCAAGAAAGAAGGCAGAGGAAAATGGAGTTTCCAAAAAGACAGAAGAAGATTGA 1398 0.402 MKQMWTQLGSFMATCMFLYTIFMRLFPPPVRAHVRKYIHKFTRFVYPYIIITVHEFTGEQLMRSEAYTAIQTYLSEHSSQGASRLKAEVVKDSNTPLVLSMDDNEEIIQEFQGVKLWWASHKSTPKTPKFSIYPASDEKKYYKLTFHKRYRELITECYLKHVLEEARVIEMKNRQLKMYTNNKTKWSHVIFEHPATFETLALNPKKKEDIINDLVKFKLGKTYYAKIGKAWKRGYLLYGPPGTGKSTMIAAMANFMNYDVYDLELTAVKDNSDLRQLLINTPGKSIIVIEDIDCSLDLTGQRKKKKERLEGKEDCDDKGSKVTLSGLLNVIDGIWSACGGERIMVFTTNFVKKLDPALIRRGRMDMHIELTYCCYEAFKVLAKNYLDIESHHLFPRIKNLLEETKMTPAAVAENLMPKSLNEEVDTCLQNLIQALETSKEVTKKAEEKARKKAEENGVSKKTEED 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4456g00001 465 Coils Coil 428 455 - -
Gabi4456g00001 465 Gene3D - 369 444 - -
Gabi4456g00001 465 ProSitePatterns AAA-protein family signature. 342 361 IPR003960 GO:0005524|GO:0016887
Gabi4456g00001 465 CDD RecA-like_BCS1 210 370 - -
Gabi4456g00001 465 SMART AAA_5 231 374 IPR003593 GO:0016887
Gabi4456g00001 465 Pfam ATPase family associated with various cellular activities (AAA) 236 371 IPR003959 GO:0005524|GO:0016887
Gabi4456g00001 465 Gene3D - 183 368 IPR027417 -
Gabi4456g00001 465 PANTHER BCS1 AAA-TYPE ATPASE 7 444 - -
Gabi4456g00001 465 MobiDBLite consensus disorder prediction 440 465 - -
Gabi4456g00001 465 FunFam AAA-ATPase ASD, mitochondrial 187 368 - -
Gabi4456g00001 465 Pfam Domain associated at C-terminal with AAA 26 121 IPR025753 -
Gabi4456g00001 465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 441 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4456g00001 Gabi-Chr4456 10362 11759 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4456g00001 210 370 Calmodulin-binding Proteins AT3G56690 25.146 1.25e-08 55.5