Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4455g00090 ATGAGACATTATGGTGTCTCACCTAGGGAGCATCATCGTATTGGGGGTTGTGAGGCTGAAGACGGTGAGCCTCAGAGTTATGTACTTCAAGCTCAAACCCATATATTCAATCACATTTTTAGCTTCATAAACTCCATGTCCCTTAAATGTGCAATTGAGTTATGCATTCCAGATGTCATACACAAGTATGGCCAACCCATGCCACTCTCACTACTCATTGCTTCACTACCAATCCACCCCTCCAAAACTGGAAGCATGAATCATTTCCTACAACTTAATGATCAACCCTTGAGCATGACATCTTTTTTGCCTTTCGTACTTGACCCGACTATGATAAATCCATGGCAGAAATTTTCTACTTGGTTTAAAAATGATGATCCTACTCCATTTTACACGGAAAATGGGATGACACTTTGGGATTATGCTTGCCATGAGCCCAAATTCAATCACGTTCTCAATGAAGCCATGGCTAGTGATGCTCGATTGATTTCCAATGTGGTCGTTGAGAAGTGCGAGGGAGTGTTCATGGGATTGGAGTCATTAGTTGATGTTGGGGGAGGCACAGGGACTATGGCAAAGGCCATTGCCAAGTCATTCCCACAATTGGAGTGTATTGTATTTGATCTCCCACATGTTGTTAATGGCTTGCAAGGAAGTGACAATCTAAAATATGTTGGAGGTGACATGTTTGAGTCAATTCCCTCTGCCGATTCCATTTTGTTAAAGTGGATATTGCATGACTGGAACGATGAGGAATGTGTGAAAATACTGAAGAAATGCAAGGAGGCACTCACTAGCAAAGGTAAAGAAGGGAAGGTGATAATCATTGAGGTCGTGATGGGGAATGAAGAGATAGATGGTGAATTTGTTGACACGAAGCTCTTCTTTGATATGGAAATGATGGCCTTGGTGACTGGAAAAGAGAGAAATGAGAAAGAATGGGCCAAGCTTTTTTTCTCTGCTGGTTTCAGTAACTACAAAATAACTCAACTTCTGGGTTTGAAGTCTCTCATTGAGGTTTATCCGTAG 1029 0.4179 MRHYGVSPREHHRIGGCEAEDGEPQSYVLQAQTHIFNHIFSFINSMSLKCAIELCIPDVIHKYGQPMPLSLLIASLPIHPSKTGSMNHFLQLNDQPLSMTSFLPFVLDPTMINPWQKFSTWFKNDDPTPFYTENGMTLWDYACHEPKFNHVLNEAMASDARLISNVVVEKCEGVFMGLESLVDVGGGTGTMAKAIAKSFPQLECIVFDLPHVVNGLQGSDNLKYVGGDMFESIPSADSILLKWILHDWNDEECVKILKKCKEALTSKGKEGKVIIIEVVMGNEEIDGEFVDTKLFFDMEMMALVTGKERNEKEWAKLFFSAGFSNYKITQLLGLKSLIEVYP 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4455g00090 342 Pfam O-methyltransferase domain 115 324 IPR001077 GO:0008171
Gabi4455g00090 342 Gene3D - 18 93 IPR036388 -
Gabi4455g00090 342 Pfam Dimerisation domain 46 86 IPR012967 GO:0046983
Gabi4455g00090 342 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 342 IPR016461 GO:0008168
Gabi4455g00090 342 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 96 340 IPR029063 -
Gabi4455g00090 342 PIRSF O-mtase 84 342 IPR016461 GO:0008168
Gabi4455g00090 342 PIRSF O-mtase 18 92 IPR016461 GO:0008168
Gabi4455g00090 342 CDD AdoMet_MTases 181 279 - -
Gabi4455g00090 342 Gene3D Vaccinia Virus protein VP39 94 342 IPR029063 -
Gabi4455g00090 342 FunFam O-methyltransferase ZRP4 93 342 - -
Gabi4455g00090 342 PANTHER O-METHYLTRANSFERASE 29 327 IPR016461 GO:0008168
Gabi4455g00090 342 SUPERFAMILY "Winged helix" DNA-binding domain 25 90 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4455g00090 Gabi-Chr4455 813962 829459 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4455g00090 46 328 Monolignol Biosynthesis Gene Families AT5G54160 31.464 1.06e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4455g00090 - K16040 gmx:100807238 475.707