Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4455g00069 ATGGCTTCCACACCTGTTATGTTCTTACTGTTCTTGATGCTATTTGCAAAAGAAGCCACAGCTGAAAAAATCATTCAGTTGGGGTCTTCGCTCTCTCCTAAAGGCAATCATAGTTCATGGGCATCAAGTTCTGGCCATTTTGCTTTTGGGTTTTACCAACAAGGTAATAGTGGCTTTGGTGTTGGAATATGGCTGGTCACTCCACCTGAAAACACAATTGTGTGGACTGCTAACCGTGATAGTTCTCCAGTCTCCTCTAATTCCTCATTGGATTTGACCAAGGATGGCCGGTTGCTTCTTCGAAATGGGAAGGAAGACCATGATCTCATTTCAACTGCAATTTCAGATTATTCAAGGTCGCTTCCATATGTTTCAAAGCCAATAGCTTCGGCATCCATGAATGATTCTGGAAACTTTGTGCTCTATGATGAGAAATCTGTTGTTATCTGGCAAAGCTTTGATGATCCAACCGACACCATATTAGGAGGTCAGTATTTAACTTCAGGTGACAGCCTGGTCTCAAGTATGTCCAAATTAGACCATTCGAGGGGAAGTTTCTATCTCAGCATGCAATATGATGGAAATCTCGTTGCTTATCCTGCGAGCAGAATACAAGATCCACAGGATACTTATTGGGCTTCACAGACTCAATTTGAGGGAAGCCATCTCAGTCTTAACGATGAAGGCTCTCTTTGCGTAACTGGTTATGTCAGAGACCTTCTCTGTCTTACTGATAGCATCCCTAGAAACAAGTCGCAGAACTCAACTTCAATCTACCGCACAACATTAGATGTAGATGGGAACTTGAGATTGTATGAGCACCAATTTGAGGGCAATACTAGCTCAACTGTGAAAATGCTGTGGCAAGCCTTGCCTGATCAATGTCAAATCCCGGGGTTTTGTGGTTTGAACAGTTATTGCTCCAACATGAGCGGCAATGCTGTGTGTGAGTGTTGTCCTGGTTTCGTCCCCTCCAAACGCAGTGGTAACGTGTCTCTGGATTGCGTGCAGAACCATAGCAAAGATGATTGTGAAAGTGTTGAAGACCCAACGATGTTGTACAATGTTACTCAATTGGACAATATGTATTGGGGTGATACTCCGTATTCAGTTATAACTGTGAAGATGGAAACTTGCAAGAAGTCTTGCCAGCAAGATTGTAATTGCGGGGCAGTATTATATTCGAACGGAAACTGCAAAAAATATAGGCTTCCACTTGTATATACCAGAAGGATTCAAAATTCATCAACCGTGGGCGTGGCCCTCCTAAAGATGCTTTCGGGTTTTTCTCCAATTCAGCCAAGTCCAACTAAGGCTAAGCCTAAGCCTAAGATTGTTATTGTTGTTGATGATAACAAGACAAGTCTGATAATGATTCTAGCCTTTACTTTGGGTTCCATTTCGTTGTTTTGTTTGGGGTTTGCGGTGTCCATTTTCTTCACTTATAGACGTAAAGTTTATATGTATAAAACGTTGTCTGCAAGTGAAAATCTGGGATTTACTGAAGATTGTTCGTTGCGTTTGTTTTCTTTTGATGAACTTGTCAAATCAACTGGAGGATTCACGGAAGAGGTGGGTAGAGGATCATTTGGAGCTGTTTATAAAGGTACAATAGGTGACAGTAACAGAAGTATTGCTGTCAAGAGATTGGAGAAGATTGTTGACGAAGGGGAGAGGGAATTCCGAGCTGAAATTACTGCCATTGCTCGAACACATCATAGGAATTTGGTTAAGCTTATTGGTTTTTGTATTGATGGATCTAGGAAGCTTCTTGTTTATGAATATGTTAGTAACGGGTCTCTTGCAAAGCTTCTCTTTAACGGTGAGAAGCACCTATCCTGGGGAGAGAAATTGAAAATTGCAATGGATGTGGCTAGAGGGGTCCTGTATCTACATGAAGAGTGTGAAGTCCGCATTATTCATTGCAATATAAAGCCTCGAAATATACTTATGGATGAAGCGTGGACTGCAAAGATCTCTGATTTTGGATTAGCAAGGCTAAAGCAGGACAATTCAGCAGGGGATGAGACAAGCCGATACCTGGCACCTGAATGGCAGAAGGATGCATCGGTATCGGTAAAAACTGACATTTACAGTTTTGGTGTGGTATTATTGGAGATTGTGTGCCGCAGAAGCAGTATAGATATGAATGTTTCCTCACCTGAGAAGATACTTCTTTCCAGCTGGGTATATCAATGCTTTGCAGCAGGGCAGTTGAATCGGCTTGTTACAGATGAAGATGATGTAGATTGGAAGATGTTGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAAGACCATCCATCTCTTCGTCCCTCAATGAAGAATGTCATCTTGATGTTGGAAGGATTGAAAGATATTCCAATTCCTCCCTCTGCAGCCCTCTTGGTTAAATAA 2400 0.4204 MASTPVMFLLFLMLFAKEATAEKIIQLGSSLSPKGNHSSWASSSGHFAFGFYQQGNSGFGVGIWLVTPPENTIVWTANRDSSPVSSNSSLDLTKDGRLLLRNGKEDHDLISTAISDYSRSLPYVSKPIASASMNDSGNFVLYDEKSVVIWQSFDDPTDTILGGQYLTSGDSLVSSMSKLDHSRGSFYLSMQYDGNLVAYPASRIQDPQDTYWASQTQFEGSHLSLNDEGSLCVTGYVRDLLCLTDSIPRNKSQNSTSIYRTTLDVDGNLRLYEHQFEGNTSSTVKMLWQALPDQCQIPGFCGLNSYCSNMSGNAVCECCPGFVPSKRSGNVSLDCVQNHSKDDCESVEDPTMLYNVTQLDNMYWGDTPYSVITVKMETCKKSCQQDCNCGAVLYSNGNCKKYRLPLVYTRRIQNSSTVGVALLKMLSGFSPIQPSPTKAKPKPKIVIVVDDNKTSLIMILAFTLGSISLFCLGFAVSIFFTYRRKVYMYKTLSASENLGFTEDCSLRLFSFDELVKSTGGFTEEVGRGSFGAVYKGTIGDSNRSIAVKRLEKIVDEGEREFRAEITAIARTHHRNLVKLIGFCIDGSRKLLVYEYVSNGSLAKLLFNGEKHLSWGEKLKIAMDVARGVLYLHEECEVRIIHCNIKPRNILMDEAWTAKISDFGLARLKQDNSAGDETSRYLAPEWQKDASVSVKTDIYSFGVVLLEIVCRRSSIDMNVSSPEKILLSSWVYQCFAAGQLNRLVTDEDDVDWKMLERMVKVGLWCVQDHPSLRPSMKNVILMLEGLKDIPIPPSAALLVK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4455g00069 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 216 IPR036426 -
Gabi4455g00069 799 ProSiteProfiles Bulb-type lectin domain profile. 22 154 IPR001480 -
Gabi4455g00069 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 31 792 - -
Gabi4455g00069 799 Gene3D - 157 298 - -
Gabi4455g00069 799 SMART blect_4 163 282 IPR001480 -
Gabi4455g00069 799 SMART blect_4 31 156 IPR001480 -
Gabi4455g00069 799 FunFam S-receptor-like serine/threonine-protein kinase 489 595 - -
Gabi4455g00069 799 FunFam PR5-like receptor kinase 596 791 - -
Gabi4455g00069 799 Gene3D Phosphorylase Kinase; domain 1 484 595 - -
Gabi4455g00069 799 FunFam Serine/threonine-protein kinase 157 298 - -
Gabi4455g00069 799 ProSiteProfiles Protein kinase domain profile. 519 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gabi4455g00069 799 Pfam Protein tyrosine and serine/threonine kinase 521 779 IPR001245 GO:0004672|GO:0006468
Gabi4455g00069 799 SUPERFAMILY Protein kinase-like (PK-like) 503 783 IPR011009 -
Gabi4455g00069 799 Gene3D - 19 154 IPR036426 -
Gabi4455g00069 799 Pfam S-locus glycoprotein domain 253 325 IPR000858 GO:0048544
Gabi4455g00069 799 FunFam Serine/threonine-protein kinase 156 284 - -
Gabi4455g00069 799 Gene3D Transferase(Phosphotransferase) domain 1 596 791 - -
Gabi4455g00069 799 Pfam D-mannose binding lectin 72 166 IPR001480 -
Gabi4455g00069 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 176 274 IPR036426 -
Gabi4455g00069 799 PIRSF SRK 1 799 IPR024171 GO:0004674
Gabi4455g00069 799 ProSitePatterns Protein kinases ATP-binding region signature. 525 548 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4455g00069 Gabi-Chr4455 601946 604563 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4455g00069 419 799 Receptor kinase-like Gene Family AT2G43700 34.527 1.23e-61 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Gabi4455g00069 PK_Tyr_Ser-Thr 8.4e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4455g00069 - - cam:101496142 1013.45