Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4455g00020 AAACGGGTGGGTAAAACAGTACTTATTATGGAATTGATCAATAACATTGCCAAAGCTCATGGAGGTGTATCTGTATTTGGTGGGGTTGGTGAGCGGACTCGTGAGGGAAATGATCTTTATATGGAAATGAAAGAATCTGGGGTAATTAACGAAAAAAATATTGCGGAATCCAAAGTAGCTCTCGTATATGGTCAAATGAATGAACCACCCGGAGCTCGTATGAGAGTTGGTTTAACTGCCCTAACTATGGCGGAATATTTTCGCGATGTCAATGAACAAGATGTACTTCTATTTATCGACAATATCTTCCGCTTCGTCCAAGCAGGATCCGAAGTATCCGCCTTATTGGGTCGCATGCCTTCCGCTGTGGGTTATCAACCCACCCTTAGTACCGAAATGGGTTCTTTACAAGAAAGAATTACTTCTACCAAACAAGGGTCCATAACATCTATTCAAGTTGTTTATGTACCTGCAGACGATTTGACCGATCCTGCCCCTGCCACGACGTTTGCACATGTAGATGCTACTACTGTATTATCAAGGGGATTAGCTGCCAAAGGTATCTATCCAGCAGTAGATCCTTTAGATTCAACGTCAACTATGCTGCAACCTCGTATCATTGGTGAAGAACATTATGAAACTGCGCAAAAGGTTAAACAAACTTTAATATATATGTATGTACGGGTGCGCTTACTCCATGTGTGTGTAAGTTTACCTTGTGAATTATGA 729 0.4143 KRVGKTVLIMELINNIAKAHGGVSVFGGVGERTREGNDLYMEMKESGVINEKNIAESKVALVYGQMNEPPGARMRVGLTALTMAEYFRDVNEQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLSTEMGSLQERITSTKQGSITSIQVVYVPADDLTDPAPATTFAHVDATTVLSRGLAAKGIYPAVDPLDSTSTMLQPRIIGEEHYETAQKVKQTLIYMYVRVRLLHVCVSLPCEL 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4455g00020 242 CDD F1-ATPase_beta_CD 3 204 - -
Gabi4455g00020 242 Gene3D - 1 232 - -
Gabi4455g00020 242 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 204 IPR027417 -
Gabi4455g00020 242 ProSitePatterns ATP synthase alpha and beta subunits signature. 190 199 IPR020003 GO:0005524
Gabi4455g00020 242 PANTHER ATP SYNTHASE 2 222 - -
Gabi4455g00020 242 Pfam ATP synthase alpha/beta family, nucleotide-binding domain 2 199 IPR000194 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4455g00020 Gabi-Chr4455 258415 259143 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4455g00020 3 199 Primary Pumps ATPases(2) AT1G78900 29.952 1.34e-16 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4455g00020 K02112 - aof:CCL56_pgp064 422.165