Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00077 ATGGGTTTACTTTCAACATCCTTAGACAGTACTAGCTGGTGGGTGTTTACACTTCCAGCCATTGTAGGAACACAAAACATGCTTAACAATCTAGTCTTGGTGATCCTAATTGCACTTTTCTCTATTGGGTTTCTAGCATGGGCTTTCTCAAGAGGAGGAGGAGGAGGAGTAGCTTGGAGAAATGGAAGGAACCAAATGGGTCAAGTCCCAATACCAGGACCCAAAGGTCTTCCAATCTTTGGCATCTTATTCAGCTTAAGCCATGGCTTACCTCACCGTACCCTTGCTTCTATGGCTTCCACTCTATCTGCTACAAAACTTATGGCCTTCAGCTTGGGCTCAACCCCTGCAGTTATCACATCAAACGCTCACATGGCACGTGAAATCTTGAACTCACCCCATTTTGCTGACCGTCCCATTAAGCAATCTGCTAAGAGCCTCATGTTCAGTCGTGCCATTGGGTTTGCACCAAACAACACATATTGGCGTTTGCTTCGTAAGGTTGCGTCAACCCACCTCTTCTCTCCGACACGCATCGCCGCCCATGAGTCCGGTCGCCAGCTTGACTGCGCCGCTATGTTGTTCGCCGTAGCGAATGAACAATCCAAATATGGACTCGTTTGCTTAAGGAAACACCTCCAAGATGCAGCTCTTAACAACATTATGGGAACCGTTTTTGGAAGAAGATACAGCCAAGAAGAGTGCCCTAATAATTGCAACGAGGTTAAAGAGCTGCATGAGATGGTGAGGGAAGGGTTTGAGCTTTTAGGAGCCTTCAATTGGTCTGATTATGTGTCTTGGATCAGCTTCTTTTATGACCCTTTTCGTATTCAAGAACGGTGCTCAGCTCTTGCTCCTCGCGTTAAGAAATTTGTCAAGCAGGTTTTGGACGAGCACCGAATGCAGGCTCCATTAATCAATGAGCTTTCTTATGCCTCGGACTTTGTGGATGTTCTGCTCTCTCTAGAGGGGGATGAGAAGCTCCAAGATGACGACATGATTGCCATTTTATGGGAGATGATATTTCGTGGAACAGATACAACAGCACTTCTTACTGAGTGGGTAATGGCTGAGCTTGTATTGAACCAAGAAGTGCAGACAAGGCTTCATGATGAGCTTGATATGGTTATGGGAGACAAGAATGATGTTACGGATGCTGATGTAATCAAAATGCCATACCTTGAAGCCATTGTGAAGGAGACATTGCGAGTGCATCCAATTGGGCCCCTCCTTTCGTGGGCCCGTTTGTCCACGTCAGATGTTCAGCTGAGTAACGGAATGGTGGTCCCAGCCAACACAACAACAATGGTGAACATGTGGACCATAACCCACGATCCTAATGTGTGGGAGGAGCCATTAATGTTCAAGCCAGAGAGATTTTTGAGGAGTGAAGGAGGGGTTGACATGGATGTGAGGGGTGTTGATCTTAGGCTTGCACCGTTTGGAGCTGGACGTAGGGTTTGTCCAGGTAAGAACTTAGGCCTTGTGACTGTGAGCCTTTGGGTGGCTAAGTTGGTTCACCAGTTTCAATGGTTCCAAGACATGGCTAACCCCGTTGACCTCACCGAGGTGCTCAAACTATCCTGTGAGATGAAGAATCCCCTCAAGGCTGTGGCTATTCCTAGGATTGCTTAA 1635 0.4703 MGLLSTSLDSTSWWVFTLPAIVGTQNMLNNLVLVILIALFSIGFLAWAFSRGGGGGVAWRNGRNQMGQVPIPGPKGLPIFGILFSLSHGLPHRTLASMASTLSATKLMAFSLGSTPAVITSNAHMAREILNSPHFADRPIKQSAKSLMFSRAIGFAPNNTYWRLLRKVASTHLFSPTRIAAHESGRQLDCAAMLFAVANEQSKYGLVCLRKHLQDAALNNIMGTVFGRRYSQEECPNNCNEVKELHEMVREGFELLGAFNWSDYVSWISFFYDPFRIQERCSALAPRVKKFVKQVLDEHRMQAPLINELSYASDFVDVLLSLEGDEKLQDDDMIAILWEMIFRGTDTTALLTEWVMAELVLNQEVQTRLHDELDMVMGDKNDVTDADVIKMPYLEAIVKETLRVHPIGPLLSWARLSTSDVQLSNGMVVPANTTTMVNMWTITHDPNVWEEPLMFKPERFLRSEGGVDMDVRGVDLRLAPFGAGRRVCPGKNLGLVTVSLWVAKLVHQFQWFQDMANPVDLTEVLKLSCEMKNPLKAVAIPRIA 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00077 544 FunFam Cytochrome P450 78A5 63 542 - -
Gabi4454g00077 544 Pfam Cytochrome P450 72 514 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 SUPERFAMILY Cytochrome P450 71 542 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 CDD CYP78 103 535 - -
Gabi4454g00077 544 PRINTS P450 superfamily signature 488 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS P450 superfamily signature 396 407 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS P450 superfamily signature 343 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS P450 superfamily signature 479 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 352 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 478 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 438 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 332 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 216 234 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 395 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PRINTS E-class P450 group I signature 488 511 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 PANTHER CYTOCHROME P450 78A7-RELATED 9 542 - -
Gabi4454g00077 544 Gene3D Cytochrome P450 63 540 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Gabi4454g00077 544 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 481 490 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00077 Gabi-Chr4454 742280 744409 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4454g00077 1 538 Cytochrome P450 AT5G09970 63.971 0.0 713
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00077 K20619 - qsa:O6P43_008036 811.986