Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00031 ATGGGGAGGAGGATATTGAATGATGCGCTGAGGACTATGGTGAATGCAGAGAGGAGAGGGAAAGCTACGGTGGAGCTCAACCCAATCTCCACTGTCATCTCTTCCTTTCTCAACATCATGAAACACCGTGGCTATATCAAGGACTTTCAAGTCTATGATCCACATAGAGTGGGGAGGATAACAGTACAACTACAAGGTAGGATTAACGATTGCAAGGCCCTTACTTACCGACAAGACCTCAAGGCAAGGGATGTTGAAGCCTTCAGATTGCGCACTCTTCCAACACATCAGTGGGGTTATGTTGTGATTACTACTCCTGATGGTGTTTTGGATCATGAAGAGGCCATTAGAAAGAATGCACAACATTTTATTTTATTGTACGTAGTGAATAATGGTACTTCCACAGTAAAGTCACACCATTTTCCCTACATTGCCGGAGGCAAATTAAATTTTGTTCTCAACCATTATACAACACAGGAAAATGAGGATCAGTGA 495 0.4283 MGRRILNDALRTMVNAERRGKATVELNPISTVISSFLNIMKHRGYIKDFQVYDPHRVGRITVQLQGRINDCKALTYRQDLKARDVEAFRLRTLPTHQWGYVVITTPDGVLDHEEAIRKNAQHFILLYVVNNGTSTVKSHHFPYIAGGKLNFVLNHYTTQENEDQ 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00031 164 Gene3D - 69 128 - -
Gabi4454g00031 164 Pfam Ribosomal protein S8 6 125 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gabi4454g00031 164 PANTHER 40S RIBOSOMAL PROTEIN S15A 1 127 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gabi4454g00031 164 SUPERFAMILY Ribosomal protein S8 3 127 IPR035987 GO:0003735|GO:0005840|GO:0006412
Gabi4454g00031 164 Gene3D - 2 68 - -
Gabi4454g00031 164 ProSitePatterns Ribosomal protein S8 signature. 99 116 IPR000630 GO:0003735|GO:0005840|GO:0006412
Gabi4454g00031 164 FunFam 40S ribosomal protein S15a 1 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00031 Gabi-Chr4454 348769 351816 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4454g00031 1 125 Cytoplasmic Ribosomal Protein Gene Family AT4G29430 77.600 1.60e-72 212
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00031 K02957 - gmx:100792186 220.32