Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gabi4454g00028 ATGGCTTCTGCTTCTCTTAGAAGTGCTTTTTTTACCTTTATTCTGATCTCTACCTTTTTTTGGGTTTCCCACGTCAAAGTATCCGAGGCACAAGCCAAACCTCCTATAGTGAAGGGACTATCATGGACCTTCTACGATTCAAGCTGCCCTAAGCTTGAGTCTATCATCAGAAAAGAGCTCAAGAAGATCTTTAACAAAGACATAGGTCAAGCTGCTGGCTTGCTTCGCGTTCACTTCCATGATTGCTTTGTTCAGGGTTGTGATGCGTCGGTTTTATTAGAAGGATCAGCAAGTGGGCCAAGTGAGCAAGATGCACCACCAAACTTGACTTTGAGGGCCTCAGCCTTTAAGATCATAGAAGACCTTCGTAGTCGTGTAGAGAAGAGATGTGGAAGAGTCGTTTCTTGTGCCGACATCACTGCCCTTGCTGCACGTGATGCTGTTTTCCTCTCAGGAGGACCAGAATATGAAATTCCCTTGGGAAGAAAAGATGGATTAACCTTTGCCACAAGGAATGTCACATTGGATAACCTTCCATCACCCACAAGCAACACCACTACCATTCTAAATTCTCTAGCTACCAAAAATCTCAACCCCACTGATGTAGTAGCCCTCTCAGGTGGCCACACCATAGGCATAGGCCACTGCAGCTCTTTCACAAAAAGACTCTACCCAAGTCAAGACCCTGTCATGGACAAAACCTTTGGAAAAAATCTAAGACTAACTTGCCCCACTAACAACACAGACAACACCACAGTGCTGGACATTCGAAGCCCCAACAAGTTTGATAACAAGTACTATGTTGACCTTATGAACCGCCAGGGACTGTTCACCTCAGACCAAGACTTGTACACTGATAAGAGGACCAAGGATATTGTAACCAGCTTTGCTGTGAACCAGAGTTTGTTTTTTGACAAGTTTGTGACTGCCATGCTCAAAATGGGTCAGCTTAAAGTGTTGACTGGAACTAAAGGGGAGATTCGTGCCAATTGCTCCGTGAGGAATACAGATAACAAATCCTTCTTGACATCCATAGTGGAAGATGTCGTTGAAGAATTGATAGAAATGTAA 1071 0.4416 MASASLRSAFFTFILISTFFWVSHVKVSEAQAKPPIVKGLSWTFYDSSCPKLESIIRKELKKIFNKDIGQAAGLLRVHFHDCFVQGCDASVLLEGSASGPSEQDAPPNLTLRASAFKIIEDLRSRVEKRCGRVVSCADITALAARDAVFLSGGPEYEIPLGRKDGLTFATRNVTLDNLPSPTSNTTTILNSLATKNLNPTDVVALSGGHTIGIGHCSSFTKRLYPSQDPVMDKTFGKNLRLTCPTNNTDNTTVLDIRSPNKFDNKYYVDLMNRQGLFTSDQDLYTDKRTKDIVTSFAVNQSLFFDKFVTAMLKMGQLKVLTGTKGEIRANCSVRNTDNKSFLTSIVEDVVEELIEM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gabi4454g00028 356 PANTHER PEROXIDASE 25-RELATED 20 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 Gene3D - 43 332 - -
Gabi4454g00028 356 FunFam Peroxidase 179 314 - -
Gabi4454g00028 356 PRINTS Haem peroxidase superfamily signature 201 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Haem peroxidase superfamily signature 152 164 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Haem peroxidase superfamily signature 71 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Haem peroxidase superfamily signature 134 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 SUPERFAMILY Heme-dependent peroxidases 35 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 CDD secretory_peroxidase 39 333 IPR033905 GO:0004601|GO:0042744
Gabi4454g00028 356 Gene3D Peroxidase, domain 2 180 315 - -
Gabi4454g00028 356 Pfam Peroxidase 57 298 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 152 167 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 73 93 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 133 143 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 114 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 200 212 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 49 68 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 ProSiteProfiles Plant heme peroxidase family profile. 39 335 IPR002016 GO:0004601|GO:0006979|GO:0020037
Gabi4454g00028 356 FunFam Peroxidase 43 191 - -
Gabi4454g00028 356 ProSitePatterns Peroxidases proximal heme-ligand signature. 201 211 IPR019793 -
Gabi4454g00028 356 ProSitePatterns Peroxidases active site signature. 71 82 IPR019794 GO:0004601
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gabi4454g00028 Gabi-Chr4454 329479 332243 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gabi4454g00028 11 356 Peroxidase AT1G71695 62.108 1.44e-165 464
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gabi4454g00028 K00430 - gmx:100775837 578.17